Plasmid NZ_CP027040.1

Sequence

Nucleotide Information

Accession NZ_CP027040.1
Description Klebsiella pneumoniae strain 16_GR_13 plasmid unnamed, complete sequence
Source refseq
Topology circular
Length 5234 bp
GC Content 0.50 %
Created at NCBI Dec. 6, 2018



Assembly

Genome Data Information

Accession GCF_001701835.2
Assembly Coverage 101


Biosample

Curated Collection Information
Accession 4868736

PLASMID INFORMATION
Genotype ST11

GEOGRAPHICAL INFORMATION
Original Query 38.03N;23.79E
Original Query Type coordinates
Coordinates (Lat/Lon) 38.03/23.79
Address Υγεία, 4, Ερυθρού Σταυρού, Agia Filothei, Municipality of Marousi, Regional Unit of North Athens, Attica, 151 23, Greece

ECOSYSTEM
Original Query Homo sapiens,stool
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

OW968151.1 See Comparison
OW968004.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP018444.1 See Comparison
NC_019988.1 See Comparison
NZ_CP143283.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP135484.1 See Comparison
CP128763.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP135484.1 See Comparison
OW968151.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
NZ_CP080356.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
OW968004.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP018444.1 See Comparison
CP128763.1 See Comparison
OW968151.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
OW968004.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
NZ_CP135484.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP018444.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP144707.1 See Comparison
CP128763.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
NZ_CP102907.1 See Comparison
OW968004.1 See Comparison
OW968151.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
CP128763.1 See Comparison
NZ_CP080356.1 See Comparison
NZ_CP018444.1 See Comparison
NC_019988.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP135484.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP102901.1 See Comparison
OW968151.1 See Comparison
OW849074.1 See Comparison
OW968004.1 See Comparison
OW848961.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP135484.1 See Comparison
NZ_CP018444.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP080356.1 See Comparison
NC_019988.1 See Comparison
NZ_CP144707.1 See Comparison
CP128763.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_CP102901.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
OW848961.1 See Comparison
NZ_CP102907.1 See Comparison
OW968151.1 See Comparison
OW968004.1 See Comparison
OW848950.1 See Comparison
OW848943.1 See Comparison
OW848936.1 See Comparison
OW848925.1 See Comparison
OW848911.1 See Comparison
OW849074.1 See Comparison
OW849027.1 See Comparison
OW849020.1 See Comparison
OW848992.1 See Comparison
NZ_CP150008.1 See Comparison
NZ_CP018444.1 See Comparison
NZ_CP080356.1 See Comparison
NC_019988.1 See Comparison
NZ_CP027040.1 See Comparison
CP139236.1 See Comparison
CP139230.1 See Comparison
NZ_CP135484.1 See Comparison
CP128763.1 See Comparison
NZ_CP102907.1 See Comparison
NZ_CP144707.1 See Comparison
NZ_CP143283.1 See Comparison
NZ_AP026528.1 See Comparison
NZ_CP101895.1 See Comparison
NZ_CP101902.1 See Comparison
NZ_CP102901.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore