Plasmid NZ_CP144709.1

Sequence

Nucleotide Information

Accession NZ_CP144709.1
Description Klebsiella pneumoniae strain B18235 plasmid pB18235_7, complete sequence
Source refseq
Topology circular
Length 4510 bp
GC Content 0.45 %
Created at NCBI April 5, 2024



Assembly

Genome Data Information

Accession GCF_036687385.1
Assembly Coverage 136


Biosample

Curated Collection Information
Accession 39434441

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Ireland
Original Query Type name
Coordinates (Lat/Lon) 52.87/-7.98
Address Ireland

ECOSYSTEM
Original Query cell culture,River estuary
Classification aquatic,cell_culture,estuary,freshwater
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP128764.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP144709.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP024196.1 See Comparison
CP128764.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP024196.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP024526.1 See Comparison
CP128764.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP024196.1 See Comparison
CP128764.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP024196.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP045682.1 See Comparison
CP128764.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP024196.1 See Comparison
CP128764.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP100082.1 See Comparison
CP128764.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison
NZ_CP045682.1 See Comparison
NZ_CP024196.1 See Comparison
NZ_CP150009.1 See Comparison
NZ_CP100082.1 See Comparison
NZ_CP091989.1 See Comparison
NZ_CP097393.1 See Comparison
NZ_CP079732.1 See Comparison
NZ_CP024533.1 See Comparison
NZ_CP018440.1 See Comparison
NZ_CP024561.1 See Comparison
NZ_CP024540.1 See Comparison
NZ_CP024526.1 See Comparison
NZ_CP024196.1 See Comparison
NZ_CP024554.1 See Comparison
NZ_CP024568.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2