Plasmid NZ_CP009777.1

Sequence

Nucleotide Information

Accession NZ_CP009777.1
Description Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPN-a68, complete sequence
Source refseq
Topology circular
Length 212192 bp
GC Content 0.53 %
Created at NCBI Jan. 21, 2015



Assembly

Genome Data Information

Accession GCF_000775395.1
Assembly Coverage None


Biosample

Curated Collection Information
Accession 2820981

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA
Original Query Type name
Coordinates (Lat/Lon) 39.78/-100.45
Address USA

ECOSYSTEM
Original Query perirectal swab
Classification gastrointestinal_system,host_associated,rectal
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP067832.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
CP067455.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020838.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP068620.1 See Comparison
CP128730.1 See Comparison
CP128766.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068616.1 See Comparison
CP067786.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP074542.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067832.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067623.1 See Comparison
CP067658.1 See Comparison
NZ_CP021834.1 See Comparison
CP067455.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP020838.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP030343.1 See Comparison
CP128766.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP070083.1 See Comparison
CP128730.1 See Comparison
NZ_CP068616.1 See Comparison
CP067832.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP074542.1 See Comparison
CP067818.1 See Comparison
CP067665.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067658.1 See Comparison
CP067770.1 See Comparison
NZ_CP010393.1 See Comparison
CP067623.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
CP067455.1 See Comparison
NZ_CP020838.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
CP128730.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
CP128766.1 See Comparison
CP067665.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP074542.1 See Comparison
CP067832.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
CP067770.1 See Comparison
NZ_CP021834.1 See Comparison
CP067455.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020838.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP074536.1 See Comparison
CP128730.1 See Comparison
CP128766.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP074542.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison
CP067832.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067455.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020838.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP136406.1 See Comparison
CP128730.1 See Comparison
CP128766.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
CP067832.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP074542.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
NZ_CP021834.1 See Comparison
CP067623.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020838.1 See Comparison
CP067455.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP136406.1 See Comparison
CP128730.1 See Comparison
CP128766.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP074542.1 See Comparison
NZ_CP110948.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP110963.1 See Comparison
NZ_CP110958.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore