Plasmid CP128730.1

Sequence

Nucleotide Information

Accession CP128730.1
Description Klebsiella pneumoniae strain CRE-234 plasmid pCRE-234_1, complete sequence
Source insd
Topology circular
Length 210928 bp
GC Content 0.53 %
Created at NCBI July 3, 2023



Assembly

Genome Data Information

Accession GCA_030388505.1
Assembly Coverage 49.2088


Biosample

Curated Collection Information
Accession 35878156

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 41.8945N;87.6208W
Original Query Type coordinates
Coordinates (Lat/Lon) 41.89/-87.62
Address Feinberg Pavilion, 251, East Huron Street, Magnificent Mile, Near North Side, Chicago, Cook County, Illinois, 60611, United States

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
CP067455.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP074536.1 See Comparison
CP067818.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067623.1 See Comparison
CP067805.1 See Comparison
CP067665.1 See Comparison
NZ_CP021834.1 See Comparison
CP067658.1 See Comparison
CP067455.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
CP128730.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067455.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP070083.1 See Comparison
CP067665.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP074536.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
NZ_CP021834.1 See Comparison
CP067455.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP068620.1 See Comparison
CP067455.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP021752.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison
NZ_CP021752.1 See Comparison
CP067818.1 See Comparison
CP067805.1 See Comparison
CP067786.1 See Comparison
CP067770.1 See Comparison
CP067665.1 See Comparison
CP067658.1 See Comparison
CP067623.1 See Comparison
CP067455.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP021544.1 See Comparison
NZ_CP021713.1 See Comparison
NZ_CP020072.1 See Comparison
NZ_CP021834.1 See Comparison
NZ_CP018430.1 See Comparison
NZ_CP018434.1 See Comparison
NZ_CP018424.1 See Comparison
NZ_CP018355.1 See Comparison
NZ_CP010393.1 See Comparison
NZ_CP043049.1 See Comparison
NZ_CP009777.1 See Comparison
NZ_CP074536.1 See Comparison
NZ_CP027152.1 See Comparison
NZ_CP027161.1 See Comparison
NZ_CP030343.1 See Comparison
NZ_CP136406.1 See Comparison
NZ_CP070083.1 See Comparison
NZ_CP068620.1 See Comparison
NZ_CP068616.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore