Plasmid NZ_AP025882.1

Sequence

Nucleotide Information

Accession NZ_AP025882.1
Description Enterobacter hormaechei strain FUJ80156 plasmid pFJMB80156_3, complete sequence
Source refseq
Topology circular
Length 2511 bp
GC Content 0.52 %
Created at NCBI June 18, 2022



Assembly

Genome Data Information

Accession GCF_023735755.1
Assembly Coverage 200


Biosample

Curated Collection Information
Accession 28888028

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 35.07N;137.00E
Original Query Type coordinates
Coordinates (Lat/Lon) 35.07/137.00
Address 藤田医科大学病院, 大根若王子線, 二村台六丁目, Toyoake, Aichi Prefecture, Chubu Region, 458-0806, Japan

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
OW968230.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
OW967948.1 See Comparison
OW849535.1 See Comparison
OW849478.1 See Comparison
OW849182.1 See Comparison
CP082687.1 See Comparison
NZ_CP072948.1 See Comparison
NZ_CP042555.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_AP022512.1 See Comparison
OW968230.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_CP103498.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025882.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
OW849478.1 See Comparison
OW849535.1 See Comparison
OW967948.1 See Comparison
NZ_CP042555.1 See Comparison
NZ_CP072948.1 See Comparison
OW849182.1 See Comparison
CP082687.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_AP022512.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_MT560071.1 See Comparison
OW849535.1 See Comparison
OW968230.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
OW967948.1 See Comparison
OW849478.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_CP103498.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
CP082687.1 See Comparison
OW849182.1 See Comparison
NZ_CP072948.1 See Comparison
OW849478.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
OW967948.1 See Comparison
NZ_CP042555.1 See Comparison
NZ_AP022512.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_CP103498.1 See Comparison
OW968230.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
NZ_CP042555.1 See Comparison
OW849535.1 See Comparison
CP082687.1 See Comparison
OW849182.1 See Comparison
NZ_CP072948.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_AP022512.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_CP103498.1 See Comparison
OW968230.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
OW967948.1 See Comparison
OW849478.1 See Comparison
OW849182.1 See Comparison
OW849535.1 See Comparison
NZ_CP072948.1 See Comparison
CP082687.1 See Comparison
NZ_AP022512.1 See Comparison
NZ_CP042555.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_CP103498.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
NZ_AP025922.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
OW849182.1 See Comparison
OW967948.1 See Comparison
OW968230.1 See Comparison
OW849535.1 See Comparison
OW849478.1 See Comparison
NZ_CP072948.1 See Comparison
CP082687.1 See Comparison
NZ_CP115008.1 See Comparison
NZ_CP042555.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_AP022512.1 See Comparison
AP028484.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_CP103498.1 See Comparison
NZ_AP025866.1 See Comparison
NZ_AP025854.1 See Comparison
NZ_AP025894.1 See Comparison
NZ_AP025870.1 See Comparison
NZ_AP025914.1 See Comparison
NZ_AP025850.1 See Comparison
NZ_AP025930.1 See Comparison
NZ_AP025886.1 See Comparison
NZ_AP025910.1 See Comparison
NZ_AP025926.1 See Comparison
NZ_AP025890.1 See Comparison
NZ_AP025862.1 See Comparison
NZ_AP025906.1 See Comparison
NZ_AP025918.1 See Comparison
NZ_AP025878.1 See Comparison
NZ_AP025898.1 See Comparison
OW968230.1 See Comparison
NZ_AP025858.1 See Comparison
NZ_AP025922.1 See Comparison
NZ_AP025902.1 See Comparison
NZ_AP025935.1 See Comparison
NZ_AP025874.1 See Comparison
OW849535.1 See Comparison
OW968143.1 See Comparison
OW968091.1 See Comparison
OW967948.1 See Comparison
OW849478.1 See Comparison
NZ_CP042555.1 See Comparison
OW849182.1 See Comparison
CP082687.1 See Comparison
NZ_CP072948.1 See Comparison
NZ_CP051136.1 See Comparison
NZ_CP135513.1 See Comparison
NZ_CP135120.1 See Comparison
NZ_CP115008.1 See Comparison
AP028484.1 See Comparison
NZ_CP058156.1 See Comparison
NZ_CP058163.1 See Comparison
NZ_AP022512.1 See Comparison
NZ_MT560071.1 See Comparison
NZ_OV753642.1 See Comparison
NZ_OV754006.1 See Comparison
NZ_CP103498.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2