PLSDB
v. 2024_05_31_v2
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Typing
Plasmid CP091130.1
Sequence
Nucleotide Information
Accession
CP091130.1
Description
Serratia marcescens strain CM2015_854 plasmid unnamed5, complete sequence
Source
insd
Topology
circular
Length
3223 bp
GC Content
0.56 %
Created at NCBI
March 2, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Serratia marcescens (615)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Yersiniaceae (1903411)
Genus
Serratia (613)
Species
Serratia_marcescens (615)
Strain
Biosample
Curated Collection Information
Accession
23485804
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
-37.88937865;144.69351204677758
Original Query Type
coordinates
Coordinates (Lat/Lon)
-37.89/144.69
Address
The University of Melbourne, Werribee Campus, 250, Princes Highway, Werribee, Melbourne, City of Wyndham, Victoria, 3030, Australia
ECOSYSTEM
Original Query
Canis lupus familiaris,pure bacterial culture,Wound fluid
Classification
cell_culture,host_associated,wound
Host-associated Taxon
Canis lupus (
9615
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
CP091129.1
CP091128.1
CP091127.1
CP091126.1
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based on Mash distance
NZ_CP145170.1
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NZ_CP042539.1
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NZ_LR890420.1
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LR890560.1
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NZ_LR890575.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_CP065170.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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NZ_CP117175.1
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CP099711.1
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NZ_OX291473.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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OX291692.1
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OX291615.1
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NZ_OX030734.1
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CP094902.1
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NZ_CP071268.1
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NZ_OW849113.1
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NZ_OW849496.1
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OW969728.1
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OW968264.1
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OW968208.1
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CP082741.1
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NZ_CP072957.1
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NZ_CP014305.2
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NZ_CP042570.1
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NZ_OX291473.1
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NZ_CP119556.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291749.1
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AP028554.1
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AP028532.1
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CP123696.1
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NZ_OX461108.1
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NZ_CP145194.1
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NZ_CP141851.1
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NZ_CP056227.1
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NZ_CP069942.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890488.1
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NZ_LR890496.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_CP044040.1
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NZ_CP024494.1
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CP024519.1
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AP028570.1
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AP028554.1
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AP028532.1
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CP123668.1
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NZ_LR890197.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_OX030734.1
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NZ_OW849113.1
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NZ_OW849161.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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NZ_CP018666.1
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NZ_CP067317.1
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NZ_CP011569.1
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NZ_CP011637.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP042544.1
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NZ_CP042570.1
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NZ_CP044040.1
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NZ_CP044112.1
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NZ_CP038599.1
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NZ_CP037740.1
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NZ_CP011658.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP135209.1
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AP028570.1
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NZ_CP126797.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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AP028560.1
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NZ_OX461108.1
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CP123668.1
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CP123696.1
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CP123709.1
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NZ_CP042539.1
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NZ_CP141851.1
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NZ_CP056227.1
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NZ_KU302804.1
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NZ_CP145170.1
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NZ_CP145194.1
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NZ_CP145186.1
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NZ_CP139851.1
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NZ_CP029444.1
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NZ_CP042529.1
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NZ_CP048358.1
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NZ_CP070585.1
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CP099711.1
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NZ_CP069901.1
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NZ_CP069942.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890393.1
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NZ_LR890233.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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NZ_CP065170.1
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LR890560.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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NZ_CP119556.1
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NZ_CP117175.1
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OW967373.1
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NZ_OX291473.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP103725.1
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NZ_OX030734.1
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NZ_CP071268.1
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NZ_OW849113.1
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NZ_OW849161.1
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NZ_OW849496.1
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OW969728.1
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OW969605.1
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OW968439.1
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OW968264.1
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OW968208.1
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OW849434.1
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OW849425.1
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OW849399.1
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OW849225.1
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OW849152.1
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OX291692.1
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OX291615.1
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CP094902.1
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OW849081.1
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OW849009.1
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OW848979.1
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NZ_CP077410.1
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CP093107.1
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CP093101.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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CP073306.1
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NZ_CP072957.1
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NZ_CP072966.1
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NZ_CP067317.1
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NZ_CP018666.1
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NZ_CP014305.2
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NZ_CP012991.1
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NZ_CP011569.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP037740.1
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NZ_CP042544.1
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NZ_CP042570.1
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NZ_CP044040.1
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NZ_CP044112.1
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NZ_CP038599.1
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NZ_OX461108.1
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NZ_CP016867.1
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CP123696.1
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CP123709.1
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NZ_CP011658.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP135209.1
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NZ_CP126797.1
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AP028570.1
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AP028560.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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CP123668.1
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NZ_CP145170.1
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NZ_CP145194.1
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NZ_CP145186.1
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NZ_CP056227.1
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NZ_CP141851.1
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NZ_CP139851.1
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NZ_CP042529.1
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NZ_KU302804.1
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NZ_CP042539.1
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NZ_CP048358.1
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NZ_CP029444.1
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NZ_CP069901.1
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NZ_CP070585.1
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NZ_CP069942.1
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NZ_CP119556.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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NZ_CP065170.1
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LR890560.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890393.1
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NZ_LR890233.1
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NZ_LR890379.1
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NZ_CP117175.1
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NZ_OX291749.1
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CP099711.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP103725.1
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NZ_OX291473.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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OW849399.1
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OX291692.1
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OX291615.1
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NZ_CP071268.1
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NZ_OW849113.1
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NZ_OW849161.1
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NZ_OW849496.1
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OW969728.1
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OW969605.1
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OW968439.1
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OW968264.1
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OW968208.1
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OW967373.1
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OW849434.1
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OW849425.1
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OW849081.1
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OW849225.1
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OW849152.1
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OW849009.1
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OW848979.1
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CP093107.1
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CP094902.1
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CP093101.1
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NZ_CP042544.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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CP073306.1
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NZ_CP014305.2
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NZ_CP011569.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP042570.1
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NZ_OX030734.1
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NZ_CP044040.1
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NZ_CP044112.1
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NZ_CP038599.1
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NZ_CP016867.1
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NZ_CP037740.1
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AP028570.1
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NZ_CP011658.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP135209.1
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NZ_CP126797.1
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AP028560.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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CP123696.1
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CP123668.1
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NZ_OX461108.1
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CP123709.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore