PLSDB
v. 2024_05_31_v2
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Typing
Plasmid OX291615.1
Sequence
Nucleotide Information
Accession
OX291615.1
Description
Serratia marcescens strain SJC1061 genome assembly, plasmid: 6
Source
insd
Topology
circular
Length
3223 bp
GC Content
0.56 %
Created at NCBI
Aug. 23, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Serratia marcescens (615)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Yersiniaceae (1903411)
Genus
Serratia (613)
Species
Serratia_marcescens (615)
Strain
Biosample
Curated Collection Information
Accession
28896722
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
United Kingdom
Original Query Type
name
Coordinates (Lat/Lon)
54.70/-3.28
Address
United Kingdom
ECOSYSTEM
Original Query
Homo sapiens,Bloodstream
Classification
blood,circulatory_system,host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
not known
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
OX291616.1
OX291614.1
OX291613.1
OX291612.1
OX291611.1
Similar Plasmids
based on Mash distance
NZ_CP145170.1
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NZ_CP145186.1
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NZ_AP028313.1
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NZ_CP141851.1
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NZ_CP056227.1
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NZ_KU302804.1
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CP052331.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890393.1
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NZ_LR890233.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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CP065862.1
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NZ_CP065170.1
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NZ_MT560069.1
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LR890243.1
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NZ_CP063002.1
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NZ_CP119556.1
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NZ_CP117175.1
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NZ_CP114360.1
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CP099711.1
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NZ_CP104686.1
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NZ_OX291473.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP103725.1
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OX291692.1
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NZ_CP071268.1
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NZ_OW849496.1
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OW849152.1
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CP093101.1
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CP082593.1
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NZ_CP072966.1
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NZ_CP011658.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_CP065170.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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NZ_CP042529.1
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NZ_CP048358.1
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CP068406.1
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NZ_CP069901.1
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NZ_CP069942.1
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NZ_LR890393.1
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NZ_LR890233.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_CP119556.1
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OW849399.1
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OW849152.1
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OW849009.1
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CP093107.1
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CP093101.1
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CP091130.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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NZ_CP073775.1
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NZ_CP012991.1
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NZ_CP011569.1
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NZ_CP011637.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP042544.1
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NZ_CP042570.1
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NZ_CP077410.1
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CP073306.1
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NZ_CP072957.1
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NZ_CP072966.1
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NZ_CP067317.1
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NZ_CP018666.1
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NZ_CP014305.2
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NZ_CP044112.1
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NZ_CP038599.1
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NZ_CP011658.1
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NZ_CP037740.1
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NZ_CP016867.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP135209.1
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NZ_CP114991.1
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NZ_CP126797.1
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NZ_CP123434.1
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AP028573.1
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AP028570.1
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AP028560.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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CP123668.1
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CP123696.1
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CP123709.1
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NZ_CP029444.1
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NZ_AP028313.1
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NZ_KU302804.1
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NZ_CP042539.1
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NZ_CP145170.1
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NZ_CP145194.1
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NZ_CP145186.1
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NZ_CP141851.1
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NZ_CP056227.1
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CP052342.1
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CP052331.1
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NZ_CP042529.1
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NZ_CP048358.1
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NZ_CP070585.1
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CP068406.1
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NZ_CP069901.1
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NZ_CP069942.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890393.1
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CP065862.1
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NZ_LR890233.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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NZ_CP104686.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP071268.1
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NZ_CP103725.1
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NZ_OW849113.1
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NZ_OW849161.1
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OX291692.1
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NZ_OX030734.1
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NZ_OW849496.1
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CP091130.1
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OW969728.1
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OW969605.1
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OW968264.1
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OW967373.1
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OW849225.1
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OW848979.1
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OW959935.1
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OW968439.1
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OW968208.1
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OW849434.1
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OW849425.1
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OW849399.1
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OW849152.1
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OW849106.1
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OW849081.1
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OW849009.1
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CP093107.1
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CP093101.1
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NZ_CP077410.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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NZ_CP066135.1
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CP073306.1
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NZ_CP073775.1
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NZ_CP072957.1
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NZ_CP072966.1
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NZ_CP012991.1
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NZ_CP067317.1
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NZ_CP018666.1
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NZ_CP014305.2
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NZ_CP011569.1
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NZ_CP011637.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP042544.1
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NZ_CP037740.1
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AP028573.1
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AP028570.1
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CP123696.1
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CP123709.1
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CP094902.1
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NZ_CP042570.1
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NZ_CP044040.1
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NZ_CP044112.1
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NZ_CP038599.1
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NZ_CP016867.1
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NZ_CP011658.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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NZ_CP126797.1
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NZ_CP114991.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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NZ_AP028313.1
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NZ_CP145170.1
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NZ_CP145194.1
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NZ_CP145186.1
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NZ_KU302804.1
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NZ_CP056227.1
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NZ_CP141851.1
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CP052342.1
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NZ_CP042539.1
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CP068406.1
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CP052331.1
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NZ_CP048358.1
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NZ_CP029444.1
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NZ_CP042529.1
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NZ_CP070585.1
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NZ_CP069901.1
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NZ_CP069942.1
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NZ_OX030734.1
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NZ_LR890379.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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CP065862.1
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LR890560.1
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LR890534.1
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LR890454.1
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NZ_CP063002.1
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NZ_CP117175.1
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NZ_CP104686.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP103725.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890684.1
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NZ_LR890197.1
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NZ_LR890725.1
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NZ_LR890207.1
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NZ_LR890393.1
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NZ_CP065170.1
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NZ_MT560069.1
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NZ_CP119556.1
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NZ_CP114360.1
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CP099711.1
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NZ_OX291473.1
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NZ_OX291479.1
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OX291692.1
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NZ_CP071268.1
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NZ_OW849113.1
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NZ_OW849161.1
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NZ_OW849496.1
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OW969728.1
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OW959935.1
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OW969605.1
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OW967373.1
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OW968264.1
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OW968208.1
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OW968439.1
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OW849434.1
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OW849425.1
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OW849399.1
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NZ_CP066135.1
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OW849225.1
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CP094902.1
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CP093107.1
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NZ_CP077410.1
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OW849152.1
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OW849106.1
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OW849081.1
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OW849009.1
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OW848979.1
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CP093101.1
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CP091130.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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NZ_CP067317.1
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CP073306.1
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NZ_CP072957.1
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NZ_CP072966.1
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NZ_CP073775.1
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NZ_CP042544.1
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NZ_CP014305.2
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NZ_CP011569.1
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NZ_CP011637.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP018666.1
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NZ_CP012991.1
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NZ_CP003994.1
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NZ_CP042570.1
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NZ_CP038599.1
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NZ_CP044040.1
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NZ_CP044112.1
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NZ_CP024494.1
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NZ_CP011658.1
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NZ_CP037740.1
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NZ_CP016867.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP126797.1
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NZ_KU302804.1
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NZ_CP114991.1
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AP028573.1
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AP028570.1
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AP028560.1
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AP028554.1
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CP123668.1
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CP123696.1
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CP123709.1
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NZ_CP141851.1
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NZ_CP056227.1
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NZ_CP135209.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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NZ_OX461108.1
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NZ_CP123434.1
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NZ_CP145170.1
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NZ_CP145194.1
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NZ_CP145186.1
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NZ_AP028313.1
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NZ_CP042539.1
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CP052331.1
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NZ_CP029444.1
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CP052342.1
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NZ_CP042529.1
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NZ_CP048358.1
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NZ_CP070585.1
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NZ_LR890379.1
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CP068406.1
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NZ_CP069901.1
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NZ_CP069942.1
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NZ_LR890420.1
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NZ_LR890488.1
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NZ_LR890575.1
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NZ_LR890347.1
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NZ_LR890684.1
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NZ_LR890372.1
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NZ_LR890567.1
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NZ_LR890197.1
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NZ_LR890386.1
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NZ_LR890725.1
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NZ_LR890496.1
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NZ_LR890207.1
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NZ_LR890383.1
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NZ_CP065170.1
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NZ_LR890393.1
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NZ_LR890233.1
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CP065862.1
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NZ_MT560069.1
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NZ_CP119556.1
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LR890560.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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NZ_CP117175.1
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NZ_OX291539.1
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NZ_CP114360.1
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CP099711.1
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NZ_OX291774.1
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OW968439.1
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OX291692.1
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OW849399.1
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OW849225.1
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OW849434.1
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OW849152.1
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OW849106.1
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CP094902.1
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OW849081.1
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OW849009.1
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OW848979.1
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CP093107.1
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CP093101.1
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NZ_CP073775.1
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CP091130.1
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CP082593.1
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CP082635.1
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CP082745.1
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CP082741.1
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CP082443.1
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CP073306.1
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NZ_CP072966.1
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NZ_CP067317.1
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NZ_CP014305.2
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NZ_CP011569.1
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NZ_CP011637.1
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NZ_CP011652.1
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NZ_CP011604.1
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NZ_CP003994.1
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NZ_CP012991.1
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NZ_CP042544.1
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NZ_CP042570.1
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NZ_CP044112.1
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NZ_CP114991.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP135209.1
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NZ_CP011658.1
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NZ_CP126797.1
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CP123668.1
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AP028573.1
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AP028570.1
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AP028560.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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CP123696.1
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CP123709.1
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CP052342.1
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NZ_CP145170.1
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CP052331.1
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NZ_CP048358.1
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CP068406.1
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NZ_LR890197.1
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NZ_LR890347.1
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NZ_LR890372.1
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NZ_LR890725.1
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NZ_LR890567.1
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NZ_LR890207.1
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NZ_LR890386.1
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NZ_LR890496.1
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NZ_LR890383.1
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NZ_LR890393.1
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CP065862.1
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LR890560.1
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LR890534.1
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LR890454.1
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LR890243.1
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NZ_CP063002.1
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OW968439.1
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NZ_CP119556.1
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NZ_CP117175.1
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NZ_CP114360.1
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CP099711.1
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OW969605.1
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NZ_CP104686.1
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NZ_OX291473.1
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NZ_OX291479.1
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NZ_OX291589.1
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NZ_OX291531.1
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NZ_OX291708.1
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NZ_OX291539.1
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NZ_OX291749.1
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NZ_OX291774.1
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NZ_OX291799.1
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NZ_CP103725.1
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OX291692.1
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OX291615.1
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NZ_OX030734.1
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NZ_CP071268.1
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NZ_OW849161.1
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NZ_OW849496.1
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OW959935.1
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OW969728.1
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OW849434.1
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OW968264.1
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OW968208.1
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OW967373.1
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OW849425.1
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OW849225.1
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OW849152.1
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OW849009.1
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CP094902.1
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CP093107.1
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CP093101.1
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CP082593.1
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CP082745.1
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CP082443.1
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NZ_CP038599.1
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NZ_CP044112.1
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NZ_CP037740.1
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NZ_CP114991.1
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CP073306.1
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NZ_CP016867.1
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NZ_CP011658.1
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NZ_CP024494.1
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CP024519.1
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CP024514.1
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CP024503.1
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CP024487.1
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NZ_CP126797.1
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AP028573.1
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AP028570.1
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AP028560.1
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AP028554.1
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AP028532.1
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AP028528.1
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AP028489.1
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AP028471.1
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NZ_CP123434.1
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CP123668.1
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CP123696.1
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CP123709.1
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NZ_OX461108.1
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Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore