Plasmid CP067595.1

Sequence

Nucleotide Information

Accession CP067595.1
Description Klebsiella pneumoniae strain ARLG-4870 plasmid pC601_3, complete sequence
Source insd
Topology circular
Length 110213 bp
GC Content 0.54 %
Created at NCBI March 1, 2022



Assembly

Genome Data Information

Accession GCF_022434955.1
Assembly Coverage 127


Biosample

Curated Collection Information
Accession 15869042

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,South
Original Query Type name
Coordinates (Lat/Lon) 33.31/-118.34
Address USA,South

ECOSYSTEM
Original Query Homo sapiens,respiratory
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP098358.1 See Comparison
NZ_OV408205.1 See Comparison
CP067918.1 See Comparison
CP067755.1 See Comparison
CP067738.1 See Comparison
CP067901.1 See Comparison
CP067893.1 See Comparison
CP067874.1 See Comparison
CP067681.1 See Comparison
NZ_CP018992.1 See Comparison
CP067639.1 See Comparison
CP067634.1 See Comparison
CP067539.1 See Comparison
CP080699.1 See Comparison
CP080690.1 See Comparison
NZ_CP027158.1 See Comparison
NZ_CP098358.1 See Comparison
CP067918.1 See Comparison
NZ_OV408205.1 See Comparison
CP067901.1 See Comparison
CP067893.1 See Comparison
CP067874.1 See Comparison
CP067738.1 See Comparison
CP067755.1 See Comparison
CP067681.1 See Comparison
CP067639.1 See Comparison
CP067539.1 See Comparison
CP067634.1 See Comparison
CP067595.1 See Comparison
CP080699.1 See Comparison
CP080690.1 See Comparison
NZ_CP018992.1 See Comparison
CP080699.1 See Comparison
NZ_CP098358.1 See Comparison
NZ_OV408205.1 See Comparison
CP067918.1 See Comparison
CP067901.1 See Comparison
CP067893.1 See Comparison
CP067874.1 See Comparison
CP067755.1 See Comparison
CP067738.1 See Comparison
NZ_CP027158.1 See Comparison
CP067681.1 See Comparison
CP067639.1 See Comparison
CP067634.1 See Comparison
CP067539.1 See Comparison
CP080690.1 See Comparison
NZ_OV408205.1 See Comparison
NZ_CP018992.1 See Comparison
NZ_CP027158.1 See Comparison
NZ_CP098358.1 See Comparison
CP067893.1 See Comparison
CP067874.1 See Comparison
CP067755.1 See Comparison
CP067738.1 See Comparison
CP067918.1 See Comparison
CP067901.1 See Comparison
NZ_CP098358.1 See Comparison
CP067681.1 See Comparison
CP067639.1 See Comparison
CP067634.1 See Comparison
CP067539.1 See Comparison
CP080699.1 See Comparison
CP080690.1 See Comparison
NZ_CP018992.1 See Comparison
NZ_CP027158.1 See Comparison
NZ_CP027158.1 See Comparison
CP067918.1 See Comparison
CP067901.1 See Comparison
CP067893.1 See Comparison
CP067639.1 See Comparison
CP067634.1 See Comparison
CP067539.1 See Comparison
CP080699.1 See Comparison
CP080690.1 See Comparison
NZ_OV408205.1 See Comparison
CP067874.1 See Comparison
CP067755.1 See Comparison
CP067738.1 See Comparison
CP067681.1 See Comparison
NZ_CP018992.1 See Comparison
NZ_CP098358.1 See Comparison
NZ_OV408205.1 See Comparison
CP067918.1 See Comparison
CP067901.1 See Comparison
CP067893.1 See Comparison
CP067874.1 See Comparison
CP067639.1 See Comparison
CP067634.1 See Comparison
CP067539.1 See Comparison
CP080699.1 See Comparison
CP080690.1 See Comparison
CP067755.1 See Comparison
CP067738.1 See Comparison
CP067681.1 See Comparison
NZ_CP027158.1 See Comparison
NZ_CP018992.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore