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v. 2024_05_31_v2
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Antimicrobial Resistance Genes
Typing
Plasmid CP030319.1
Sequence
Nucleotide Information
Accession
CP030319.1
Description
Klebsiella pneumoniae strain 11021 plasmid p11021-2, complete sequence
Source
insd
Topology
circular
Length
169824 bp
GC Content
0.53 %
Created at NCBI
Jan. 27, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Biosample
Curated Collection Information
Accession
9499692
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
29.57N;106.55E
Original Query Type
coordinates
Coordinates (Lat/Lon)
29.57/106.55
Address
嘉陵江滨江路, 大溪沟街道, Yuzhong District, Chongqing, 400014, China
ECOSYSTEM
Original Query
Homo sapiens,Physical
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
Urinary System Infection
DOID/SYMP
Urinary tract infection
(
DOID:0080784
)
An urinary system disease that is characterized by an infection in any part of the urinary system, including the kidneys, ureters, bladder or urethra.
Visualization
PNG
JSON
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Plasmids from same Biosample
CP030318.1
Similar Plasmids
based on Mash distance
NZ_CP142389.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_MF168405.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_CP039820.1
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CP030319.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_MN842295.1
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NZ_CP064248.1
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NZ_CP064253.1
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NZ_CP061347.1
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NZ_CP066897.1
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NZ_CP090219.1
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NZ_OM144977.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP081821.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_CP040835.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP036372.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_MF168405.1
See Comparison
NZ_CP023942.1
See Comparison
NZ_OQ821203.1
See Comparison
NZ_CP142389.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_CP064248.1
See Comparison
NZ_CP039820.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_CP064253.1
See Comparison
NZ_CP061347.1
See Comparison
NZ_MN842295.1
See Comparison
NZ_CP090219.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_OM144977.1
See Comparison
NZ_CP066897.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP081821.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_CP040835.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP036372.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_CP039820.1
See Comparison
NZ_MF168405.1
See Comparison
NZ_CP023942.1
See Comparison
NZ_OQ821203.1
See Comparison
NZ_CP142389.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_CP066897.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_CP064248.1
See Comparison
NZ_CP064253.1
See Comparison
NZ_CP061347.1
See Comparison
NZ_MN842295.1
See Comparison
NZ_CP090219.1
See Comparison
NZ_OM144977.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP081821.1
See Comparison
NZ_CP040835.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP036372.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_OQ821203.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_CP023942.1
See Comparison
NZ_MF168405.1
See Comparison
NZ_CP142389.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_CP039820.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_MN842295.1
See Comparison
NZ_CP064248.1
See Comparison
NZ_CP064253.1
See Comparison
NZ_CP061347.1
See Comparison
NZ_CP090219.1
See Comparison
NZ_CP036372.1
See Comparison
NZ_OM144977.1
See Comparison
NZ_CP066897.1
See Comparison
NZ_CP040835.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP081821.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_CP023942.1
See Comparison
NZ_CP142389.1
See Comparison
NZ_OQ821203.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_MF168405.1
See Comparison
NZ_CP081821.1
See Comparison
NZ_CP039820.1
See Comparison
NZ_OM144977.1
See Comparison
NZ_CP066897.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_CP064248.1
See Comparison
NZ_CP064253.1
See Comparison
NZ_CP061347.1
See Comparison
NZ_MN842295.1
See Comparison
NZ_CP090219.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_CP040835.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_CP036372.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_OQ821203.1
See Comparison
NZ_CP142389.1
See Comparison
NZ_MK036888.1
See Comparison
NZ_CP023942.1
See Comparison
NZ_MF168403.1
See Comparison
NZ_MF168405.1
See Comparison
NZ_MF133495.1
See Comparison
NZ_CP039820.1
See Comparison
NZ_CP064248.1
See Comparison
NZ_CP053017.1
See Comparison
NZ_CP064253.1
See Comparison
NZ_CP087647.1
See Comparison
NZ_CP061347.1
See Comparison
NZ_MN842295.1
See Comparison
NZ_CP090219.1
See Comparison
NZ_OM144977.1
See Comparison
NZ_CP066897.1
See Comparison
NZ_CP087608.1
See Comparison
NZ_CP040835.1
See Comparison
NZ_MT269842.1
See Comparison
NZ_MT269841.1
See Comparison
NZ_MT269833.1
See Comparison
NZ_MT269819.1
See Comparison
NZ_MT269843.1
See Comparison
NZ_MT269832.1
See Comparison
NZ_MT269822.1
See Comparison
NZ_MT269840.1
See Comparison
NZ_MT269835.1
See Comparison
NZ_CP028541.2
See Comparison
NZ_CP081821.1
See Comparison
NZ_CP036372.1
See Comparison
NZ_CP025952.1
See Comparison
NZ_CP023942.1
See Comparison
NZ_OQ821203.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore