Plasmid NZ_ON882014.1

Sequence

Nucleotide Information

Accession NZ_ON882014.1
Description Klebsiella pneumoniae strain SX6 plasmid pSX6, complete sequence
Source refseq
Topology circular
Length 52398 bp
GC Content 0.51 %
Created at NCBI Oct. 10, 2022



Biosample

Curated Collection Information
Accession 19185753

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Shanxi
Original Query Type name
Coordinates (Lat/Lon) 37.00/112.00
Address China,Shanxi

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP124706.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_KU051708.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_CP124706.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_KU051708.1 See Comparison
NZ_ON882014.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_CP124706.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_CP124706.1 See Comparison
NZ_KU051708.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_KU051708.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_CP124706.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_MH909337.1 See Comparison
NZ_KU051708.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_CP124706.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_KX711879.1 See Comparison
NZ_KU051707.1 See Comparison
NZ_CP064181.1 See Comparison
NZ_CP059714.1 See Comparison
NZ_CP098781.1 See Comparison
NZ_CP028486.1 See Comparison
NZ_CP137172.1 See Comparison
NZ_KU051708.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore