Plasmid NZ_MH917122.1

Sequence

Nucleotide Information

Accession NZ_MH917122.1
Description Klebsiella pneumoniae strain Kp715 plasmid pSZF_KPC, complete sequence
Source refseq
Topology circular
Length 106201 bp
GC Content 0.53 %
Created at NCBI June 3, 2020



Biosample

Curated Collection Information
Accession 14228004

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China
Original Query Type name
Coordinates (Lat/Lon) 34.41/86.03
Address China

ECOSYSTEM
Original Query Homo sapiens,sputum
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_MT269837.1 See Comparison
NC_032103.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_MT269837.1 See Comparison
NC_032103.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP139402.1 See Comparison
NC_032103.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP064234.1 See Comparison
NC_032103.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP075318.1 See Comparison
NC_032103.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_CP129698.1 See Comparison
NC_032103.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore