Plasmid NZ_CP075318.1

Sequence

Nucleotide Information

Accession NZ_CP075318.1
Description Klebsiella pneumoniae strain DD521 plasmid pDD521.2, complete sequence
Source refseq
Topology circular
Length 105939 bp
GC Content 0.53 %
Created at NCBI May 26, 2021



Assembly

Genome Data Information

Accession GCF_018454365.1
Assembly Coverage 120


Biosample

Curated Collection Information
Accession 19073635

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 34.05436N;111.04782E
Original Query Type coordinates
Coordinates (Lat/Lon) 34.05/111.05
Address 东大街, Lushi, Chengguan, Lushi County, Sanmenxia, Henan, China

ECOSYSTEM
Original Query Homo sapiens,hospital
Classification anthropogenic,hospital,host_associated
Host-associated Taxon
  • Homo sapiens (9606)
Host-associated Age 66 years old
Host-associated Sex male

DISEASE
Original Query pneumonia
DOID/SYMP
  • Pneumonia (DOID:552 )
    • A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP141219.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison
NC_032103.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NC_032103.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MK183753.1 See Comparison
NC_032103.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP075318.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_MT269837.1 See Comparison
NC_032103.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_MT269837.1 See Comparison
NC_032103.1 See Comparison
NZ_CP129698.1 See Comparison
NZ_CP141219.1 See Comparison
NZ_MK183753.1 See Comparison
NZ_CP139402.1 See Comparison
NZ_MK191023.1 See Comparison
NZ_MH917122.1 See Comparison
NZ_CP139374.1 See Comparison
NZ_CP139389.1 See Comparison
NZ_KU295132.1 See Comparison
NZ_MT810364.1 See Comparison
NZ_MN615880.1 See Comparison
NZ_CP064234.1 See Comparison
NZ_CP064231.1 See Comparison
NZ_MT269837.1 See Comparison
NZ_CP082004.1 See Comparison
NZ_CP082030.1 See Comparison
NZ_CP073374.1 See Comparison
NZ_CP129698.1 See Comparison
NC_032103.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore