Plasmid NZ_LR135252.1

Sequence

Nucleotide Information

Accession	NZ_LR135252.1
Description	Enterococcus faecium isolate E6988 plasmid 10
Source	refseq
Topology	linear
Length	2947 bp
GC Content	0.35 %
Created at NCBI	Jan. 2, 2019

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterococcus faecium (1352)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Lactobacillales (186826)
Family	Enterococcaceae (81852)
Genus	Enterococcus (1350)
Species	Enterococcus_faecium (1352)
Strain

Assembly

Genome Data Information

Accession	GCF_900639415.1
Assembly Coverage	174

Biosample

Curated Collection Information

Accession	10006740

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_LR135426.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
NZ_LR135242.1	See Comparison
AP026599.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_CP083927.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_LR135418.1	See Comparison
NZ_LR135413.1	See Comparison
AP026599.1	See Comparison
NZ_LR135426.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
NZ_LR135426.1	See Comparison
NZ_CP083927.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_LR135242.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_LR135418.1	See Comparison
NZ_LR135413.1	See Comparison
AP026599.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
NZ_LR135426.1	See Comparison
NZ_LR135242.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_LR135418.1	See Comparison
NZ_LR135413.1	See Comparison
NZ_CP083927.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
AP026599.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_LR135242.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_LR135418.1	See Comparison
NZ_LR135413.1	See Comparison
NZ_CP083927.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_LR135426.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
NZ_CP083927.1	See Comparison
AP026599.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_CP131840.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_LR135242.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_LR135418.1	See Comparison
NZ_LR135413.1	See Comparison
NZ_LR135426.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_CP131855.1	See Comparison
NZ_CP131808.1	See Comparison
NZ_LR135418.1	See Comparison
AP026599.1	See Comparison
NZ_OU016034.1	See Comparison
NZ_LR135252.1	See Comparison
NZ_LR135242.1	See Comparison
NZ_LR135407.1	See Comparison
NZ_LR135400.1	See Comparison
NZ_CP083927.1	See Comparison
NZ_CP083917.1	See Comparison
NZ_OU015953.1	See Comparison
NZ_OU016044.1	See Comparison
NZ_LR135233.1	See Comparison
NZ_LR135413.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore