Plasmid NZ_CP135670.1

Sequence

Nucleotide Information

Accession NZ_CP135670.1
Description Escherichia coli strain TUM9975 plasmid pMTY9975_untypable2, complete sequence
Source refseq
Topology circular
Length 4064 bp
GC Content 0.50 %
Created at NCBI Oct. 7, 2023



Assembly

Genome Data Information

Accession GCF_032375245.1
Assembly Coverage 115


Biosample

Curated Collection Information
Accession 35769058

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Japan
Original Query Type name
Coordinates (Lat/Lon) 36.57/139.24
Address Japan

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP141203.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP047534.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_CP141203.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP047534.1 See Comparison
NZ_CP141203.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_CP047534.1 See Comparison
NZ_CP141203.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_CP047534.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP135670.1 See Comparison
NZ_CP141203.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_CP047534.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_CP050752.1 See Comparison
NZ_CP141203.1 See Comparison
NZ_CP054350.1 See Comparison
NZ_CP050755.1 See Comparison
NZ_LT795116.1 See Comparison
NZ_LR890696.1 See Comparison
NZ_CP090537.1 See Comparison
NZ_CP047552.1 See Comparison
NZ_CP047534.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore