Plasmid NZ_CP130920.1

Sequence

Nucleotide Information

Accession NZ_CP130920.1
Description Klebsiella pneumoniae strain 2023CK-00047 plasmid unnamed4, complete sequence
Source refseq
Topology circular
Length 9293 bp
GC Content 0.55 %
Created at NCBI July 28, 2023



Assembly

Genome Data Information

Accession GCF_028364475.1
Assembly Coverage 14


Biosample

Curated Collection Information
Accession 32978013

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA
Original Query Type name
Coordinates (Lat/Lon) 39.78/-100.45
Address USA

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP090938.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP083003.1 See Comparison
CP088424.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP126795.1 See Comparison
NZ_CP126795.1 See Comparison
NZ_CP142968.1 See Comparison
CP052312.1 See Comparison
CP052210.1 See Comparison
CP052529.1 See Comparison
CP052180.1 See Comparison
CP052171.1 See Comparison
CP052166.1 See Comparison
CP052161.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
NZ_CP095135.1 See Comparison
CP088424.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP024884.1 See Comparison
CP128741.1 See Comparison
NZ_CP125141.1 See Comparison
CP128741.1 See Comparison
NZ_CP125141.1 See Comparison
CP052439.1 See Comparison
CP052447.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052355.1 See Comparison
CP052396.1 See Comparison
CP052318.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
CP052238.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
OW967952.1 See Comparison
CP097398.1 See Comparison
NZ_CP090938.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP083003.1 See Comparison
NZ_CP142968.1 See Comparison
CP052447.1 See Comparison
CP052312.1 See Comparison
CP052210.1 See Comparison
CP052529.1 See Comparison
CP052180.1 See Comparison
CP052171.1 See Comparison
CP052166.1 See Comparison
CP052161.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
CP052424.1 See Comparison
CP052439.1 See Comparison
CP052513.1 See Comparison
CP052355.1 See Comparison
CP052396.1 See Comparison
CP052318.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
CP052238.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP090938.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP095135.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
OW967952.1 See Comparison
CP097398.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP083003.1 See Comparison
CP088424.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP126795.1 See Comparison
CP052529.1 See Comparison
CP128741.1 See Comparison
NZ_CP125141.1 See Comparison
NZ_CP142968.1 See Comparison
CP052312.1 See Comparison
CP052210.1 See Comparison
CP052180.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052171.1 See Comparison
CP052355.1 See Comparison
CP052396.1 See Comparison
CP052166.1 See Comparison
CP052318.1 See Comparison
CP052161.1 See Comparison
CP052360.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052541.1 See Comparison
CP052206.1 See Comparison
CP052536.1 See Comparison
CP052238.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
CP052439.1 See Comparison
CP052447.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
CP097398.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
NZ_CP095135.1 See Comparison
NZ_CP090938.1 See Comparison
OW967952.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP083003.1 See Comparison
CP088424.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP142968.1 See Comparison
CP128741.1 See Comparison
NZ_CP125141.1 See Comparison
NZ_CP126795.1 See Comparison
NZ_CP130920.1 See Comparison
NZ_CP066091.1 See Comparison
CP052171.1 See Comparison
CP052166.1 See Comparison
CP052161.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
CP052439.1 See Comparison
CP052447.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052355.1 See Comparison
CP052312.1 See Comparison
CP052210.1 See Comparison
CP052529.1 See Comparison
CP052180.1 See Comparison
CP052396.1 See Comparison
CP052318.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
CP052238.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
NZ_CP101900.1 See Comparison
NZ_CP090938.1 See Comparison
OW967952.1 See Comparison
CP097398.1 See Comparison
NZ_CP095135.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP083003.1 See Comparison
CP088424.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP125141.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP126795.1 See Comparison
CP128741.1 See Comparison
CP052312.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
NZ_CP142968.1 See Comparison
CP052210.1 See Comparison
CP052486.1 See Comparison
CP052439.1 See Comparison
CP052529.1 See Comparison
CP052447.1 See Comparison
CP052180.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052171.1 See Comparison
CP052355.1 See Comparison
CP052166.1 See Comparison
CP052396.1 See Comparison
CP052161.1 See Comparison
CP052318.1 See Comparison
CP052146.1 See Comparison
CP052191.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
CP052238.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
OW967952.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
CP097398.1 See Comparison
NZ_CP095135.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP090938.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP083003.1 See Comparison
CP088424.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP125141.1 See Comparison
NZ_CP032177.1 See Comparison
NZ_CP126795.1 See Comparison
CP128741.1 See Comparison
CP052312.1 See Comparison
NZ_CP142968.1 See Comparison
CP052210.1 See Comparison
CP052529.1 See Comparison
CP052180.1 See Comparison
CP052171.1 See Comparison
CP052166.1 See Comparison
CP052161.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
CP052439.1 See Comparison
CP052447.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052355.1 See Comparison
CP052396.1 See Comparison
CP052318.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
CP052238.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP046650.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
NZ_CP095135.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
OW967952.1 See Comparison
CP097398.1 See Comparison
CP088424.1 See Comparison
NZ_CP090938.1 See Comparison
NZ_CP089434.1 See Comparison
NZ_CP022921.1 See Comparison
NZ_CP083003.1 See Comparison
NZ_CP077780.1 See Comparison
NZ_CP032177.1 See Comparison
CP128741.1 See Comparison
NZ_CP126795.1 See Comparison
NZ_CP024884.1 See Comparison
NZ_CP142968.1 See Comparison
NZ_CP046650.1 See Comparison
CP052536.1 See Comparison
CP052497.1 See Comparison
CP052486.1 See Comparison
CP052439.1 See Comparison
CP052447.1 See Comparison
CP052424.1 See Comparison
CP052513.1 See Comparison
CP052355.1 See Comparison
CP052396.1 See Comparison
CP052318.1 See Comparison
CP052360.1 See Comparison
CP052234.1 See Comparison
CP052283.1 See Comparison
CP052191.1 See Comparison
CP052305.1 See Comparison
CP052206.1 See Comparison
NZ_CP061395.1 See Comparison
NZ_CP099262.1 See Comparison
NZ_CP125141.1 See Comparison
CP052312.1 See Comparison
CP052210.1 See Comparison
CP052529.1 See Comparison
CP052180.1 See Comparison
CP052171.1 See Comparison
CP052166.1 See Comparison
CP052161.1 See Comparison
CP052146.1 See Comparison
CP052548.1 See Comparison
CP052541.1 See Comparison
CP052238.1 See Comparison
NZ_CP066091.1 See Comparison
NZ_CP053362.1 See Comparison
NZ_CP048782.1 See Comparison
NZ_CP048804.1 See Comparison
NZ_CP101894.1 See Comparison
NZ_CP101900.1 See Comparison
OW967952.1 See Comparison
CP097398.1 See Comparison
NZ_CP095135.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2