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v. 2024_05_31_v2
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Antimicrobial Resistance Genes
Typing
Plasmid NZ_CP127237.1
Sequence
Nucleotide Information
Accession
NZ_CP127237.1
Description
Klebsiella pneumoniae strain 130128 plasmid p1_130128, complete sequence
Source
refseq
Topology
circular
Length
205645 bp
GC Content
0.53 %
Created at NCBI
June 20, 2023
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_030284485.1
Assembly Coverage
150
Biosample
Curated Collection Information
Accession
35632517
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
China,Chengdu,Sichuan
Original Query Type
name
Coordinates (Lat/Lon)
30.64/104.07
Address
China,Chengdu,Sichuan
ECOSYSTEM
Original Query
Homo sapiens,pure culture,rectal swab
Classification
cell_culture,gastrointestinal_system,host_associated,rectal
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP127239.1
NZ_CP127238.1
NZ_CP127236.1
Similar Plasmids
based on Mash distance
NZ_CP082031.1
See Comparison
NZ_CP043359.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP039809.1
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NZ_CP066525.1
See Comparison
CP046969.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP107479.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP107514.1
See Comparison
NZ_CP107399.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP066896.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP082031.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP043359.1
See Comparison
CP046969.1
See Comparison
NZ_CP039809.1
See Comparison
NZ_CP066525.1
See Comparison
NZ_CP107479.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP107514.1
See Comparison
NZ_CP107399.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP066896.1
See Comparison
NZ_CP043359.1
See Comparison
NZ_CP082031.1
See Comparison
NZ_CP127237.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP039809.1
See Comparison
NZ_CP066525.1
See Comparison
CP046969.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP107514.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107399.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107479.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP066896.1
See Comparison
NZ_CP043359.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP082031.1
See Comparison
NZ_CP039809.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP066525.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107514.1
See Comparison
NZ_CP107479.1
See Comparison
CP046969.1
See Comparison
NZ_CP107399.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP066896.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP082031.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP039809.1
See Comparison
NZ_CP043359.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP066525.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107479.1
See Comparison
NZ_CP107514.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107399.1
See Comparison
CP046969.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP033402.1
See Comparison
NZ_CP066896.1
See Comparison
NZ_CP036302.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP082031.1
See Comparison
NZ_CP043359.1
See Comparison
NZ_CP107413.1
See Comparison
NZ_CP039809.1
See Comparison
NZ_CP137341.1
See Comparison
NZ_CP066525.1
See Comparison
NZ_CP107469.1
See Comparison
NZ_CP107479.1
See Comparison
NZ_CP107519.1
See Comparison
NZ_CP107419.1
See Comparison
NZ_CP107504.1
See Comparison
NZ_CP107514.1
See Comparison
CP046969.1
See Comparison
NZ_CP107459.1
See Comparison
NZ_CP107399.1
See Comparison
NZ_CP107474.1
See Comparison
NZ_CP107499.1
See Comparison
NZ_CP107437.1
See Comparison
NZ_CP107442.1
See Comparison
NZ_CP107509.1
See Comparison
NZ_CP107448.1
See Comparison
NZ_CP097628.1
See Comparison
NZ_CP107484.1
See Comparison
NZ_CP107489.1
See Comparison
NZ_CP107494.1
See Comparison
NZ_CP107427.1
See Comparison
NZ_CP066896.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore