Plasmid NZ_CP126881.1

Sequence

Nucleotide Information

Accession NZ_CP126881.1
Description Enterobacter hormaechei strain Ehh_21 plasmid pEh21_3, complete sequence
Source refseq
Topology circular
Length 2495 bp
GC Content 0.51 %
Created at NCBI Sept. 28, 2023



Assembly

Genome Data Information

Accession GCF_030848005.1
Assembly Coverage 95


Biosample

Curated Collection Information
Accession 35394410

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Switzerland
Original Query Type name
Coordinates (Lat/Lon) 46.80/8.23
Address Switzerland

ECOSYSTEM
Original Query Homo sapiens,isolated bacterial culture,stools
Classification cell_culture,fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



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based on Mash distance

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OW849172.1 See Comparison
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OW849192.1 See Comparison
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NZ_CP085750.1 See Comparison
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NZ_CP039507.1 See Comparison
NZ_CP126766.1 See Comparison
NZ_CP126859.1 See Comparison
NZ_CP114993.1 See Comparison
NZ_CP126830.1 See Comparison
NZ_CP115003.1 See Comparison
NZ_CP042576.1 See Comparison
NZ_CP042498.1 See Comparison
NZ_CP042492.1 See Comparison
NZ_CP035389.1 See Comparison
NZ_CP126773.1 See Comparison
NZ_CP126818.1 See Comparison
NZ_CP126810.1 See Comparison
NZ_CP126872.1 See Comparison
NZ_CP114984.1 See Comparison
NZ_CP126823.1 See Comparison
NZ_CP126814.1 See Comparison
NZ_CP126875.1 See Comparison
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NZ_CP122446.1 See Comparison
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NZ_CP142024.1 See Comparison
NZ_CP056135.1 See Comparison
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NZ_CP058190.1 See Comparison
NZ_CP058195.1 See Comparison
NZ_CP058205.1 See Comparison
NZ_CP058171.1 See Comparison
NZ_CP058159.1 See Comparison
NZ_CP058152.1 See Comparison
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NZ_CP049191.1 See Comparison
NZ_CP069458.1 See Comparison
NZ_CP034758.1 See Comparison
NZ_CP070188.1 See Comparison
NZ_CP069554.1 See Comparison
NZ_CP045316.1 See Comparison
NZ_CP065942.1 See Comparison
NZ_CP051324.1 See Comparison
NZ_CP063228.1 See Comparison
NZ_CP047720.1 See Comparison
NZ_CP047735.1 See Comparison
NZ_CP062144.1 See Comparison
NZ_CP059415.1 See Comparison
NZ_CP059420.1 See Comparison
NZ_CP059423.1 See Comparison
NZ_CP102493.1 See Comparison
NZ_CP056726.1 See Comparison
NZ_CP056680.1 See Comparison
NZ_CP056759.1 See Comparison
NZ_CP056736.1 See Comparison
NZ_CP056459.1 See Comparison
NZ_CP056750.1 See Comparison
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NZ_CP103726.1 See Comparison
NZ_OX291729.1 See Comparison
NZ_CP103644.1 See Comparison
OX291693.1 See Comparison
OX291616.1 See Comparison
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OW959918.1 See Comparison
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OW969701.1 See Comparison
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OW849386.1 See Comparison
OW848815.1 See Comparison
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OW849177.1 See Comparison
OW849172.1 See Comparison
OW849166.1 See Comparison
OW849146.1 See Comparison
OW849122.1 See Comparison
OW849192.1 See Comparison
NZ_CP095176.1 See Comparison
NZ_CP095169.1 See Comparison
NZ_CP095179.1 See Comparison
NZ_CP083852.1 See Comparison
CP067542.1 See Comparison
NZ_CP066114.1 See Comparison
NZ_CP066107.1 See Comparison
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NZ_CP090149.1 See Comparison
NZ_CP085782.1 See Comparison
NZ_CP085750.1 See Comparison
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CP083236.1 See Comparison
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CP082152.1 See Comparison
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HG796403.1 See Comparison
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CP042504.1 See Comparison
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CP128420.1 See Comparison
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AP028542.1 See Comparison
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Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore