Plasmid NZ_CP056759.1

Sequence

Nucleotide Information

Accession NZ_CP056759.1
Description Enterobacter hormaechei strain RHBSTW-00198 plasmid pRHBSTW-00198_4, complete sequence
Source refseq
Topology circular
Length 2495 bp
GC Content 0.51 %
Created at NCBI Aug. 3, 2020



Assembly

Genome Data Information

Accession GCF_013744415.1
Assembly Coverage 107.203


Biosample

Curated Collection Information

Accession 15148534

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query United Kingdom
Original Query Type name
Coordinates (Lat/Lon) 54.70/-3.28
Address United Kingdom

ECOSYSTEM
Original Query culture,Freshwater sample from downstream of wastewater treatment plant
Classification aquatic,cell_culture,freshwater
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization


Plasmids from same Biosample



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NZ_CP058171.1 See Comparison
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NZ_CP058152.1 See Comparison
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NZ_CP104470.1 See Comparison
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NZ_OX291480.1 See Comparison
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NZ_CP071270.1 See Comparison
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OW968473.1 See Comparison
OW968422.1 See Comparison
OW968399.1 See Comparison
OW968033.1 See Comparison
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NZ_CP088222.1 See Comparison
OW969708.1 See Comparison
OW969701.1 See Comparison
OW967810.1 See Comparison
OW849386.1 See Comparison
OW849464.1 See Comparison
OW849372.1 See Comparison
OW849364.1 See Comparison
OW848815.1 See Comparison
OW849177.1 See Comparison
OW849172.1 See Comparison
OW849166.1 See Comparison
OW849146.1 See Comparison
OW849197.1 See Comparison
OW849192.1 See Comparison
OW849122.1 See Comparison
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NZ_CP039507.1 See Comparison
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CP123605.1 See Comparison
NZ_AP026682.1 See Comparison
NZ_CP106666.1 See Comparison
NZ_CP058190.1 See Comparison
NZ_CP056158.1 See Comparison
NZ_CP056135.1 See Comparison
NZ_CP058195.1 See Comparison
NZ_CP058205.1 See Comparison
NZ_CP058171.1 See Comparison
NZ_CP058159.1 See Comparison
CP056563.1 See Comparison
NZ_CP058152.1 See Comparison
CP056445.1 See Comparison
NZ_CP042511.1 See Comparison
CP056770.1 See Comparison
CP055463.1 See Comparison
NZ_OX291729.1 See Comparison
NZ_CP034758.1 See Comparison
NZ_CP070188.1 See Comparison
NZ_CP065942.1 See Comparison
NZ_CP047720.1 See Comparison
NZ_CP047735.1 See Comparison
NZ_CP062144.1 See Comparison
NZ_CP115700.1 See Comparison
NZ_CP115695.1 See Comparison
NZ_CP102493.1 See Comparison
NZ_CP104470.1 See Comparison
NZ_CP049049.1 See Comparison
NZ_AP019821.1 See Comparison
NZ_CP049195.1 See Comparison
NZ_CP049191.1 See Comparison
NZ_CP069458.1 See Comparison
NZ_CP069554.1 See Comparison
NZ_CP045316.1 See Comparison
NZ_CP051324.1 See Comparison
NZ_CP063228.1 See Comparison
NZ_CP059415.1 See Comparison
NZ_CP059420.1 See Comparison
NZ_CP059423.1 See Comparison
NZ_CP056726.1 See Comparison
NZ_CP056680.1 See Comparison
NZ_CP056736.1 See Comparison
NZ_CP056459.1 See Comparison
NZ_CP056750.1 See Comparison
CP074552.1 See Comparison
NZ_CP114155.1 See Comparison
NZ_CP103726.1 See Comparison
NZ_OX291480.1 See Comparison
OX291693.1 See Comparison
NZ_CP103644.1 See Comparison
NZ_CP071270.1 See Comparison
OX291616.1 See Comparison
NZ_AP025846.1 See Comparison
NZ_CP068236.1 See Comparison
OW969708.1 See Comparison
NZ_OW967522.1 See Comparison
NZ_OW969665.1 See Comparison
NZ_CP088222.1 See Comparison
OW959918.1 See Comparison
OW969701.1 See Comparison
OW968473.1 See Comparison
OW849464.1 See Comparison
OW967810.1 See Comparison
OW849510.1 See Comparison
OW968422.1 See Comparison
OW968399.1 See Comparison
OW968033.1 See Comparison
OW849172.1 See Comparison
OW849372.1 See Comparison
OW849177.1 See Comparison
OW848815.1 See Comparison
OW849386.1 See Comparison
OW849364.1 See Comparison
OW849197.1 See Comparison
OW849192.1 See Comparison
OW849166.1 See Comparison
NZ_CP095176.1 See Comparison
OW849146.1 See Comparison
OW849122.1 See Comparison
NZ_CP095169.1 See Comparison
NZ_CP095179.1 See Comparison
NZ_CP083852.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore