Plasmid NZ_CP119155.1

Sequence

Nucleotide Information

Accession	NZ_CP119155.1
Description	Enterococcus faecium strain GENOMIC22-005 plasmid pCFSAN126950_05, complete sequence
Source	refseq
Topology	circular
Length	6303 bp
GC Content	0.36 %
Created at NCBI	March 13, 2023

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterococcus faecium (1352)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Lactobacillales (186826)
Family	Enterococcaceae (81852)
Genus	Enterococcus (1350)
Species	Enterococcus_faecium (1352)
Strain

Assembly

Genome Data Information

Accession	GCF_029167665.1
Assembly Coverage	700

Biosample

Curated Collection Information

Accession	33438667

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Denmark
Original Query Type	name
Coordinates (Lat/Lon)	56.21/9.30
Address	Denmark

ECOSYSTEM

Original Query	EQA test strain
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP131829.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP066657.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_LR135376.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_AP028418.1	See Comparison
NZ_CP131829.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP066657.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_LR135376.1	See Comparison
NZ_AP028418.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP131829.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_CP066657.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_LR135376.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_AP028418.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_CP131829.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP066657.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_LR135376.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_AP028418.1	See Comparison
NZ_CP131829.1	See Comparison
NZ_CP066657.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP065551.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_AP028418.1	See Comparison
NZ_CP131829.1	See Comparison
NZ_CP066657.1	See Comparison
NZ_CP066650.1	See Comparison
NZ_CP066602.1	See Comparison
NZ_CP066596.1	See Comparison
NZ_CP066589.1	See Comparison
NZ_CP066664.1	See Comparison
NZ_CP066642.1	See Comparison
NZ_CP066671.1	See Comparison
NZ_CP066626.1	See Comparison
NZ_CP066618.1	See Comparison
NZ_CP066611.1	See Comparison
NZ_CP066477.1	See Comparison
NZ_CP066413.1	See Comparison
NZ_CP066447.1	See Comparison
NZ_CP066431.1	See Comparison
NZ_CP066462.1	See Comparison
NZ_CP066387.1	See Comparison
NZ_CP066484.1	See Comparison
NZ_CP066470.1	See Comparison
NZ_CP066419.1	See Comparison
NZ_LR135376.1	See Comparison
AP031281.1	See Comparison
AP031272.1	See Comparison
AP031249.1	See Comparison
NZ_CP062273.1	See Comparison
NZ_AP024835.1	See Comparison
NZ_CP093951.1	See Comparison
NZ_CP059801.1	See Comparison
NZ_CP119155.1	See Comparison
NZ_AP026778.1	See Comparison
NZ_CP096214.1	See Comparison
NZ_AP024841.1	See Comparison
NZ_CP072715.1	See Comparison
NZ_CP035651.1	See Comparison
NZ_CP035657.1	See Comparison
NZ_CP035645.1	See Comparison
CP035663.1	See Comparison
NZ_LR135376.1	See Comparison
NZ_AP028418.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore