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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP066650.1
Sequence
Nucleotide Information
Accession
NZ_CP066650.1
Description
Enterococcus faecium strain Dallas 148 plasmid p148_6kb, complete sequence
Source
refseq
Topology
circular
Length
6303 bp
GC Content
0.36 %
Created at NCBI
Dec. 30, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterococcus faecium (1352)
Lineage
Superkingdom
Bacteria (2)
Phylum
Bacillota (1239)
Class
Bacilli (91061)
Order
Lactobacillales (186826)
Family
Enterococcaceae (81852)
Genus
Enterococcus (1350)
Species
Enterococcus_faecium (1352)
Strain
Assembly
Genome Data Information
Accession
GCF_016415425.1
Assembly Coverage
122
Biosample
Curated Collection Information
Accession
17038104
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA,Dallas
Original Query Type
name
Coordinates (Lat/Lon)
32.78/-96.80
Address
USA,Dallas
ECOSYSTEM
Original Query
Homo sapiens,cell culture,rectal swab
Classification
cell_culture,gastrointestinal_system,host_associated,rectal
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP066652.1
NZ_CP066651.1
NZ_CP066649.1
NZ_CP066648.1
NZ_CP066647.1
NZ_CP066646.1
Similar Plasmids
based on Mash distance
NZ_CP072715.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_AP028418.1
See Comparison
NZ_CP131829.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_AP024835.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_AP022344.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP119155.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_AP028418.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_CP072715.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP131829.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_AP022344.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_CP119155.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_CP072715.1
See Comparison
NZ_AP024835.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_CP131829.1
See Comparison
NZ_AP028418.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_AP022344.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_CP119155.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_AP024835.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_CP072715.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_CP119155.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_AP028418.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_AP022344.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP066650.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_CP131829.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_AP024835.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_CP072715.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_CP131829.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_AP028418.1
See Comparison
NZ_CP119155.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_AP022344.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_CP072715.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_AP024835.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_LR135376.1
See Comparison
NZ_CP035651.1
See Comparison
NZ_CP035657.1
See Comparison
NZ_CP035645.1
See Comparison
CP035663.1
See Comparison
NZ_CP096214.1
See Comparison
NZ_AP028418.1
See Comparison
NZ_CP131829.1
See Comparison
NZ_CP066657.1
See Comparison
NZ_CP066602.1
See Comparison
NZ_CP066596.1
See Comparison
NZ_CP066589.1
See Comparison
NZ_CP066664.1
See Comparison
NZ_CP066642.1
See Comparison
NZ_CP066671.1
See Comparison
NZ_CP066626.1
See Comparison
NZ_CP066618.1
See Comparison
NZ_CP066611.1
See Comparison
NZ_CP066477.1
See Comparison
NZ_CP066413.1
See Comparison
NZ_CP119155.1
See Comparison
AP031281.1
See Comparison
AP031272.1
See Comparison
AP031249.1
See Comparison
NZ_AP022344.1
See Comparison
NZ_CP066447.1
See Comparison
NZ_CP066431.1
See Comparison
NZ_CP066462.1
See Comparison
NZ_CP066387.1
See Comparison
NZ_CP066484.1
See Comparison
NZ_CP066470.1
See Comparison
NZ_CP066419.1
See Comparison
NZ_CP065551.1
See Comparison
NZ_CP062273.1
See Comparison
NZ_CP059801.1
See Comparison
NZ_AP026778.1
See Comparison
NZ_AP024841.1
See Comparison
NZ_CP093951.1
See Comparison
NZ_AP024835.1
See Comparison
Identical Plasmids
100% Sequence Identity
NZ_CP065551.1
Sequence
Accession
:
NZ_CP065551.1
Description
: Enterococcus faecium strain Dallas 1 plasmid p1_6.3kb, complete sequence
Source
: refseq
Created at NCBI
: Dec. 13, 2020
Host Taxonomy
Assigned Host
:
Enterococcus faecium (1352)
Superkingdom
:
Bacteria (2)
Phylum
:
Bacillota (1239)
Class
:
Bacilli (91061)
Order
:
Lactobacillales (186826)
Family
:
Enterococcaceae (81852)
Genus
:
Enterococcus (1350)
Species
:
Enterococcus_faecium (1352)
Strain
:
Biosample
Accession
:
17012772
GEOGRAPHICAL INFORMATION
Original Query
: USA,Dallas
Original Query Type
: name
Address
: USA,Dallas
Coordinates
(Lat/Lon): 32.78/-96.80
ECOSYSTEM
Original Query
: Homo sapiens,Cell culture,Rectal swab
Classification
: cell_culture,gastrointestinal_system,host_associated,rectal
Host-associated Taxon
:
Homo sapiens (
9606
)
Visualization
PNG
JSON
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore