Plasmid NZ_CP110358.1

Sequence

Nucleotide Information

Accession NZ_CP110358.1
Description Enterobacter hormaechei strain ECC2783 plasmid pECC2783_d, complete sequence
Source refseq
Topology circular
Length 42848 bp
GC Content 0.50 %
Created at NCBI Nov. 9, 2022



Assembly

Genome Data Information

Accession GCF_026015945.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 31455096

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 30.3N;120.2E
Original Query Type coordinates
Coordinates (Lat/Lon) 30.30/120.20
Address 杭州濮家小学教育集团(笕新校区), 全福桥路, 池塘庙, Jianqiao, Shangcheng District, Hangzhou City, Zhejiang, 310017, China

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query pancreatitis
DOID/SYMP
  • Pancreatitis (DOID:4989 )
    • A pancreas disease that is characterized by inflammation of the pancreas.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110915.1 See Comparison
NC_023331.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_CP145927.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_KP726894.1 See Comparison
NC_023331.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP110915.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore