Plasmid NZ_CP047392.1

Sequence

Nucleotide Information

Accession NZ_CP047392.1
Description Serratia marcescens strain 1602 plasmid pKPC-2-HENAN1602, complete sequence
Source refseq
Topology circular
Length 42724 bp
GC Content 0.50 %
Created at NCBI Jan. 16, 2020



Assembly

Genome Data Information

Accession GCF_009858195.1
Assembly Coverage 44.27


Biosample

Curated Collection Information
Accession 13676638

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Zhengzhou
Original Query Type name
Coordinates (Lat/Lon) 34.76/113.65
Address China,Zhengzhou

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_CP110915.1 See Comparison
NC_023331.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_MF072963.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_CP047392.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_CP110915.1 See Comparison
NZ_CP145927.1 See Comparison
NZ_CP082176.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison
NZ_CP145918.1 See Comparison
NZ_MN904741.1 See Comparison
NZ_CP136606.1 See Comparison
NZ_CP139689.1 See Comparison
NZ_CP139684.1 See Comparison
NZ_MH328006.1 See Comparison
NZ_MF072963.1 See Comparison
NZ_KP726894.1 See Comparison
NZ_CP082176.1 See Comparison
NZ_CP110358.1 See Comparison
NZ_CP110915.1 See Comparison
NC_023331.1 See Comparison
NZ_CP126883.1 See Comparison


Identical Plasmids

100% Sequence Identity


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore