Plasmid NZ_CP096193.1

Sequence

Nucleotide Information

Accession	NZ_CP096193.1
Description	Enterobacter roggenkampii isolate C3-17 plasmid unnamed6, complete sequence
Source	refseq
Topology	circular
Length	4938 bp
GC Content	0.55 %
Created at NCBI	May 3, 2022

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterobacter roggenkampii (1812935)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Enterobacter (547)
Species	Enterobacter_roggenkampii (1812935)
Strain

Assembly

Genome Data Information

Accession	GCF_023195715.1
Assembly Coverage	691

Biosample

Curated Collection Information

Accession	27117675

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	35.70153025N;139.76415553E
Original Query Type	coordinates
Coordinates (Lat/Lon)	35.70/139.76
Address	Tokyo Medical and Dental University, Sotobori-dori Avenue, Yushima 1-chome, Bunkyō, Tokyo, 113-8431, Japan

ECOSYSTEM

Original Query	sink
Classification	anthropogenic
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

AP028568.1	See Comparison
AP028552.1	See Comparison
NZ_CP083712.1	See Comparison
NZ_AP022472.1	See Comparison
NZ_CP103671.1	See Comparison
OW849506.1	See Comparison
OW849323.1	See Comparison
NC_021293.2	See Comparison
NZ_CP115694.1	See Comparison
NZ_CP083848.1	See Comparison
CP085738.1	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP073047.1	See Comparison
NZ_CP010364.1	See Comparison
NZ_CP115694.1	See Comparison
AP028568.1	See Comparison
AP028552.1	See Comparison
NC_021293.2	See Comparison
NZ_AP022472.1	See Comparison
NZ_CP103671.1	See Comparison
CP085738.1	See Comparison
OW849506.1	See Comparison
OW849323.1	See Comparison
NZ_CP083712.1	See Comparison
NZ_CP083848.1	See Comparison
NZ_CP073047.1	See Comparison
NC_021293.2	See Comparison
AP028568.1	See Comparison
AP028552.1	See Comparison
NZ_AP022472.1	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP010364.1	See Comparison
CP085738.1	See Comparison
NZ_CP115694.1	See Comparison
NZ_CP103671.1	See Comparison
NZ_CP083848.1	See Comparison
OW849506.1	See Comparison
OW849323.1	See Comparison
NZ_CP083712.1	See Comparison
NZ_CP073047.1	See Comparison
OW849506.1	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP010364.1	See Comparison
AP028568.1	See Comparison
AP028552.1	See Comparison
NC_021293.2	See Comparison
NZ_AP022472.1	See Comparison
NZ_CP115694.1	See Comparison
NZ_CP103671.1	See Comparison
NZ_CP083848.1	See Comparison
OW849323.1	See Comparison
CP085738.1	See Comparison
NZ_CP073047.1	See Comparison
NZ_CP083712.1	See Comparison
NZ_AP022472.1	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP010364.1	See Comparison
AP028568.1	See Comparison
AP028552.1	See Comparison
OW849506.1	See Comparison
NC_021293.2	See Comparison
NZ_CP115694.1	See Comparison
NZ_CP103671.1	See Comparison
NZ_CP083848.1	See Comparison
OW849323.1	See Comparison
CP085738.1	See Comparison
NZ_CP073047.1	See Comparison
NZ_CP083712.1	See Comparison
NC_021293.2	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP010364.1	See Comparison
NZ_AP022472.1	See Comparison
AP028568.1	See Comparison
AP028552.1	See Comparison
NZ_CP096193.1	See Comparison
NZ_CP103671.1	See Comparison
OW849323.1	See Comparison
NZ_CP115694.1	See Comparison
OW849506.1	See Comparison
NZ_CP083848.1	See Comparison
CP085738.1	See Comparison
NZ_CP083712.1	See Comparison
NZ_CP011049.1	See Comparison
NZ_CP073047.1	See Comparison
NZ_CP010364.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore