Plasmid NZ_CP087671.1

Sequence

Nucleotide Information

Accession NZ_CP087671.1
Description Klebsiella pneumoniae strain KP53 plasmid P2-NDM-1, complete sequence
Source refseq
Topology circular
Length 153633 bp
GC Content 0.53 %
Created at NCBI Nov. 29, 2021



Assembly

Genome Data Information

Accession GCF_020990405.1
Assembly Coverage 12


Biosample

Curated Collection Information
Accession 23139350

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Shandong Province
Original Query Type name
Coordinates (Lat/Lon) 36.00/119.00
Address China,Shandong Province

ECOSYSTEM
Original Query housefly,cell culture
Classification cell_culture,host_associated
Host-associated Taxon
  • Musca domestica (7370)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP019053.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_CP019053.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_CP019053.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP019053.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_CP019053.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_CP019053.1 See Comparison
NZ_OQ338157.1 See Comparison
NZ_CP047308.1 See Comparison
NZ_MH061195.1 See Comparison
NZ_CP104926.1 See Comparison
NZ_CP104606.1 See Comparison
NZ_CP104923.1 See Comparison
NZ_OL348378.1 See Comparison
NZ_CP104722.1 See Comparison
NZ_CP087671.1 See Comparison


Identical Plasmids

100% Sequence Identity


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore