Plasmid NZ_CP084817.1

Sequence

Nucleotide Information

Accession	NZ_CP084817.1
Description	Klebsiella quasipneumoniae subsp. quasipneumoniae strain SB1124 plasmid pKqq_SB1124_11, complete sequence
Source	refseq
Topology	circular
Length	1916 bp
GC Content	0.51 %
Created at NCBI	Oct. 20, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella quasipneumoniae (1667327)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_quasipneumoniae (1463165)
Strain

Assembly

Genome Data Information

Accession	GCF_020525825.1
Assembly Coverage	50

Biosample

Curated Collection Information

Accession	22024802

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Netherlands
Original Query Type	name
Coordinates (Lat/Lon)	52.24/5.53
Address	Netherlands

ECOSYSTEM

Original Query	Water (environment),Whole organism
Classification	aquatic,host_associated
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP070913.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
LR890561.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP056860.1	See Comparison
NZ_CP089002.1	See Comparison
NZ_CP070040.1	See Comparison
CP024520.1	See Comparison
NZ_CP056380.1	See Comparison
CP056630.1	See Comparison
NZ_CP070913.1	See Comparison
NZ_CP142976.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
LR890561.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP089002.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP056860.1	See Comparison
CP024520.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP142976.1	See Comparison
NZ_CP056380.1	See Comparison
CP056630.1	See Comparison
NZ_CP070913.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
LR890561.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP089002.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP056860.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
CP024520.1	See Comparison
NZ_CP142976.1	See Comparison
NZ_CP056380.1	See Comparison
CP056630.1	See Comparison
NZ_CP070913.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_LR890499.1	See Comparison
LR890561.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP056860.1	See Comparison
CP024520.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP089002.1	See Comparison
CP056630.1	See Comparison
NZ_CP142976.1	See Comparison
NZ_CP056380.1	See Comparison
LR890561.1	See Comparison
NZ_CP070913.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP056860.1	See Comparison
NZ_CP084817.1	See Comparison
NZ_CP089002.1	See Comparison
CP056630.1	See Comparison
CP024520.1	See Comparison
NZ_CP142976.1	See Comparison
NZ_CP056380.1	See Comparison
NZ_CP070913.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_CP089002.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
NZ_CP056198.1	See Comparison
NZ_CP056860.1	See Comparison
LR890561.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP142976.1	See Comparison
CP024520.1	See Comparison
NZ_CP056380.1	See Comparison
NZ_CP070913.1	See Comparison
CP056630.1	See Comparison
NZ_LR890190.1	See Comparison
NZ_CP070040.1	See Comparison
NZ_CP069877.1	See Comparison
NZ_CP070090.1	See Comparison
NZ_LR890208.1	See Comparison
NZ_LR890394.1	See Comparison
NZ_LR890234.1	See Comparison
NZ_LR890489.1	See Comparison
NZ_LR890348.1	See Comparison
NZ_LR890568.1	See Comparison
NZ_LR890387.1	See Comparison
NZ_LR890499.1	See Comparison
NZ_CP056198.1	See Comparison
LR890561.1	See Comparison
LR890535.1	See Comparison
LR890455.1	See Comparison
LR890244.1	See Comparison
NZ_CP056860.1	See Comparison
NZ_CP056380.1	See Comparison
CP024520.1	See Comparison
NZ_CP089002.1	See Comparison
NZ_CP142976.1	See Comparison
CP056630.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore

Detected typing markers by plasmidfinder

NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2
NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2