Plasmid NZ_CP079612.1

Sequence

Nucleotide Information

Accession	NZ_CP079612.1
Description	Klebsiella pneumoniae subsp. pneumoniae strain WRC15_AI1547PC plasmid pAI1547P_P6, complete sequence
Source	refseq
Topology	circular
Length	4991 bp
GC Content	0.45 %
Created at NCBI	July 27, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (72407)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_019317025.1
Assembly Coverage	91

Biosample

Curated Collection Information

Accession	20130504

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	12.9165N;79.1325E
Original Query Type	coordinates
Coordinates (Lat/Lon)	12.92/79.13
Address	NH38, Vellore, Vellore District, Tamil Nadu, 632008, India

ECOSYSTEM

Original Query	Homo sapiens,Pus
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	Abscess
DOID/SYMP	Abscess (SYMP:0000672 ) None

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP070443.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP079641.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP113194.1	See Comparison
NZ_CP093918.1	See Comparison
CP067715.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP079184.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP095561.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP070443.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
NZ_CP113194.1	See Comparison
NZ_CP093918.1	See Comparison
CP067715.1	See Comparison
NZ_CP079641.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP079184.1	See Comparison
NZ_CP095561.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP113194.1	See Comparison
NZ_CP070443.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
CP067715.1	See Comparison
NZ_CP093918.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079641.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP079184.1	See Comparison
NZ_CP079612.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP095561.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP113194.1	See Comparison
NZ_CP070443.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
NZ_CP093918.1	See Comparison
NZ_CP079641.1	See Comparison
CP067715.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP079184.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP095561.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP093918.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
NZ_CP070443.1	See Comparison
NZ_CP113194.1	See Comparison
CP067715.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP079184.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP079641.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP095561.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP093918.1	See Comparison
NZ_CP070423.1	See Comparison
NZ_CP070457.1	See Comparison
NZ_CP113194.1	See Comparison
NZ_CP070443.1	See Comparison
NZ_CP079641.1	See Comparison
NZ_CP083060.1	See Comparison
NZ_CP079178.1	See Comparison
NZ_CP079184.1	See Comparison
CP067715.1	See Comparison
NZ_CP079697.1	See Comparison
NZ_CP079191.1	See Comparison
NZ_CP079687.1	See Comparison
NZ_CP072471.1	See Comparison
NZ_CP036334.1	See Comparison
NZ_CP036324.1	See Comparison
NZ_CP035127.1	See Comparison
NZ_CP138760.1	See Comparison
NZ_CP130678.1	See Comparison
NZ_CP033951.1	See Comparison
NZ_CP095561.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore