Plasmid NZ_CP073777.1

Sequence

Nucleotide Information

Accession NZ_CP073777.1
Description Enterobacter hormaechei strain SH19PTE2 plasmid pYUSHP2-6, complete sequence
Source refseq
Topology circular
Length 2317 bp
GC Content 0.49 %
Created at NCBI May 12, 2021



Assembly

Genome Data Information

Accession GCF_018255815.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 18859124

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 31.23N;121.47E
Original Query Type coordinates
Coordinates (Lat/Lon) 31.23/121.47
Address People's Square, 120, People's Avenue, Jiangyin, Nanjingdonglu Subdistrict, Shanghai, Huangpu District, Shanghai, 200001, China

ECOSYSTEM
Original Query pig feces
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP117187.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
NZ_OV754014.1 See Comparison
NZ_OX030735.1 See Comparison
NZ_OW848985.1 See Comparison
NZ_OW969882.1 See Comparison
OW849515.1 See Comparison
OW969788.1 See Comparison
OW969702.1 See Comparison
OW968400.1 See Comparison
OW968346.1 See Comparison
OW848896.1 See Comparison
OW849511.1 See Comparison
OW849373.1 See Comparison
NZ_CP085760.1 See Comparison
OW849194.1 See Comparison
NZ_CP084865.1 See Comparison
NZ_OV754014.1 See Comparison
NZ_CP075558.1 See Comparison
NZ_CP117187.1 See Comparison
OW968400.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
NZ_OW969882.1 See Comparison
NZ_OX030735.1 See Comparison
NZ_OW848985.1 See Comparison
OW969788.1 See Comparison
OW969702.1 See Comparison
OW968346.1 See Comparison
OW848896.1 See Comparison
OW849511.1 See Comparison
OW849515.1 See Comparison
OW849373.1 See Comparison
OW849194.1 See Comparison
NZ_CP084865.1 See Comparison
NZ_CP085760.1 See Comparison
NZ_OW848985.1 See Comparison
NZ_OX030735.1 See Comparison
NZ_OW969882.1 See Comparison
NZ_CP075558.1 See Comparison
NZ_CP117187.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
NZ_OV754014.1 See Comparison
OW969788.1 See Comparison
OW969702.1 See Comparison
NZ_CP085760.1 See Comparison
OW968400.1 See Comparison
OW849194.1 See Comparison
NZ_CP084865.1 See Comparison
OW968346.1 See Comparison
OW848896.1 See Comparison
OW849515.1 See Comparison
OW849511.1 See Comparison
OW849373.1 See Comparison
NZ_CP075558.1 See Comparison
NZ_OW969882.1 See Comparison
NZ_CP117187.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
NZ_OV754014.1 See Comparison
NZ_OX030735.1 See Comparison
OW969788.1 See Comparison
NZ_OW848985.1 See Comparison
OW968346.1 See Comparison
OW969702.1 See Comparison
OW848896.1 See Comparison
OW968400.1 See Comparison
OW849515.1 See Comparison
OW849511.1 See Comparison
OW849373.1 See Comparison
NZ_OV754014.1 See Comparison
NZ_CP117187.1 See Comparison
OW849194.1 See Comparison
NZ_CP085760.1 See Comparison
NZ_CP084865.1 See Comparison
NZ_CP075558.1 See Comparison
NZ_OW969882.1 See Comparison
NZ_OX030735.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
OW969788.1 See Comparison
NZ_OW848985.1 See Comparison
OW969702.1 See Comparison
OW968346.1 See Comparison
OW848896.1 See Comparison
OW968400.1 See Comparison
OW849515.1 See Comparison
OW849511.1 See Comparison
NZ_CP085760.1 See Comparison
OW849194.1 See Comparison
OW849373.1 See Comparison
NZ_CP084865.1 See Comparison
NZ_CP073777.1 See Comparison
NZ_CP075558.1 See Comparison
NZ_OW969882.1 See Comparison
NZ_CP117187.1 See Comparison
NZ_OV753996.1 See Comparison
NZ_OV753991.1 See Comparison
NZ_OV754014.1 See Comparison
NZ_OX030735.1 See Comparison
NZ_OW848985.1 See Comparison
OW969788.1 See Comparison
OW968346.1 See Comparison
OW969702.1 See Comparison
OW849515.1 See Comparison
OW968400.1 See Comparison
OW849511.1 See Comparison
OW849373.1 See Comparison
OW848896.1 See Comparison
NZ_CP075558.1 See Comparison
OW849194.1 See Comparison
NZ_CP085760.1 See Comparison
NZ_CP084865.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore