Plasmid NZ_CP069643.1

Sequence

Nucleotide Information

Accession	NZ_CP069643.1
Description	Escherichia coli strain SSGNw2 plasmid pMUT2, complete sequence
Source	refseq
Topology	circular
Length	5514 bp
GC Content	0.46 %
Created at NCBI	May 3, 2022

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_023206735.1
Assembly Coverage	51

Biosample

Curated Collection Information

Accession	17732903

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	USA,Boston,MA
Original Query Type	name
Coordinates (Lat/Lon)	42.36/-71.06
Address	USA,Boston,MA

ECOSYSTEM

Original Query	cell culture,laboratory evolution
Classification	anthropogenic,cell_culture,construction
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

NZ_CP069644.1

Similar Plasmids

based on Mash distance

NZ_CP148106.1	See Comparison
NZ_CP058219.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP069643.1	See Comparison
NZ_CP148106.1	See Comparison
CP042609.1	See Comparison
NZ_CP035487.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP058219.1	See Comparison
NZ_CP035487.1	See Comparison
CP042609.1	See Comparison
CP042609.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP058219.1	See Comparison
NZ_CP148106.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP148106.1	See Comparison
NZ_CP035487.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP058219.1	See Comparison
NZ_CP035487.1	See Comparison
CP042609.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP148106.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP058219.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP148106.1	See Comparison
CP042609.1	See Comparison
NZ_CP035487.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP069634.1	See Comparison
NZ_CP069637.1	See Comparison
NZ_CP069622.1	See Comparison
NZ_CP069625.1	See Comparison
NZ_CP069640.1	See Comparison
NZ_CP069628.1	See Comparison
NZ_CP069631.1	See Comparison
NZ_CP058219.1	See Comparison
CP042609.1	See Comparison
NZ_CP069671.1	See Comparison
NZ_CP023342.1	See Comparison
NZ_CP035487.1	See Comparison

Identical Plasmids

100% Sequence Identity

NZ_CP069637.1

Sequence

Accession: NZ_CP069637.1
Description: Escherichia coli strain SSGw2 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732901

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture,laboratory evolution
Classification: anthropogenic,cell_culture,construction
Host-associated Taxon:

Visualization

NZ_CP069634.1

Sequence

Accession: NZ_CP069634.1
Description: Escherichia coli strain SSGw1 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732900

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture,laboratory evolution
Classification: anthropogenic,cell_culture,construction
Host-associated Taxon:

Visualization

NZ_CP069628.1

Sequence

Accession: NZ_CP069628.1
Description: Escherichia coli strain ESM1.4 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732898

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture,laboratory evolution
Classification: anthropogenic,cell_culture,construction
Host-associated Taxon:

Visualization

NZ_CP069640.1

Sequence

Accession: NZ_CP069640.1
Description: Escherichia coli strain SSGNw1 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732902

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture,laboratory evolution
Classification: anthropogenic,cell_culture,construction
Host-associated Taxon:

Visualization

NZ_CP069631.1

Sequence

Accession: NZ_CP069631.1
Description: Escherichia coli strain ESM2.2 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732899

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture,laboratory evolution
Classification: anthropogenic,cell_culture,construction
Host-associated Taxon:

Visualization

NZ_CP069622.1

Sequence

Accession: NZ_CP069622.1
Description: Escherichia coli strain PBP5 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732895

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture
Classification: cell_culture
Host-associated Taxon:

Visualization

NZ_CP069625.1

Sequence

Accession: NZ_CP069625.1
Description: Escherichia coli strain PBP8 plasmid pMUT2, complete sequence
Source: refseq
Created at NCBI: May 3, 2022

Host Taxonomy

Assigned Host: Escherichia coli (562)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Escherichia (561)
Species : Escherichia_coli (562)
Strain:

Biosample

Accession: 17732897

GEOGRAPHICAL INFORMATION

Original Query: USA,Boston,MA
Original Query Type: name
Address: USA,Boston,MA
Coordinates (Lat/Lon): 42.36/-71.06

ECOSYSTEM

Original Query: cell culture
Classification: cell_culture
Host-associated Taxon:

Visualization

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore