Plasmid NZ_CP069466.1

Sequence

Nucleotide Information

Accession NZ_CP069466.1
Description Escherichia coli strain FDAARGOS_1249 plasmid unnamed7
Source refseq
Topology linear
Length 1582 bp
GC Content 0.51 %
Created at NCBI Feb. 16, 2021



Assembly

Genome Data Information

Accession GCF_016889125.1
Assembly Coverage 864.31


Biosample

Curated Collection Information
Accession 16357391

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,WA
Original Query Type name
Coordinates (Lat/Lon) 47.29/-120.21
Address USA,WA

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP128887.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_CP100492.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_CP128887.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_CP100492.1 See Comparison
NZ_CP128887.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_CP100492.1 See Comparison
NZ_CP128887.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP100492.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_CP128887.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_KM107846.1 See Comparison
NZ_CP100492.1 See Comparison
NZ_CP128887.1 See Comparison
NZ_CP124414.1 See Comparison
NZ_AP027587.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_OZ040557.1 See Comparison
NZ_CP069466.1 See Comparison
NZ_CP060064.1 See Comparison
NZ_CP060060.1 See Comparison
NZ_CP099343.1 See Comparison
CP098967.1 See Comparison
NZ_CP075631.1 See Comparison
NZ_CP100492.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore