Plasmid NZ_CP053693.1

Sequence

Nucleotide Information

Accession NZ_CP053693.1
Description Enterobacter hormaechei strain Eh27 plasmid pEh27_2, complete sequence
Source refseq
Topology circular
Length 274120 bp
GC Content 0.46 %
Created at NCBI June 27, 2022



Assembly

Genome Data Information

Accession GCF_023897035.1
Assembly Coverage 110


Biosample

Curated Collection Information
Accession 14943915

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 22.5575N;114.129E
Original Query Type coordinates
Coordinates (Lat/Lon) 22.56/114.13
Address Aiguo Road, Xinyi, Huangbei Sub-district, Luohu District, Shenzhen, Guangdong Province, 518000, China

ECOSYSTEM
Original Query Homo sapiens,Deep venous catheter
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_AP023448.1 See Comparison
NZ_AP022511.1 See Comparison
NZ_CP064657.1 See Comparison
OW849370.1 See Comparison
NZ_CP099761.1 See Comparison
OW849458.1 See Comparison
NZ_OX442404.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_CP041734.1 See Comparison
NZ_AP023448.1 See Comparison
NZ_AP022511.1 See Comparison
NZ_CP064657.1 See Comparison
OW849458.1 See Comparison
NZ_CP099761.1 See Comparison
NZ_CP041734.1 See Comparison
OW849370.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_OX442404.1 See Comparison
NZ_CP064657.1 See Comparison
NZ_AP023448.1 See Comparison
NZ_AP022511.1 See Comparison
NZ_CP099761.1 See Comparison
NZ_CP053693.1 See Comparison
OW849458.1 See Comparison
NZ_CP041734.1 See Comparison
OW849370.1 See Comparison
NZ_AP023448.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_OX442404.1 See Comparison
NZ_AP022511.1 See Comparison
OW849458.1 See Comparison
NZ_CP064657.1 See Comparison
NZ_CP099761.1 See Comparison
OW849370.1 See Comparison
NZ_OX442404.1 See Comparison
NZ_CP041734.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_AP023448.1 See Comparison
NZ_AP022511.1 See Comparison
NZ_CP099761.1 See Comparison
NZ_CP064657.1 See Comparison
NZ_OX442404.1 See Comparison
OW849370.1 See Comparison
OW849458.1 See Comparison
NZ_CP041734.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_AP023448.1 See Comparison
NZ_AP022511.1 See Comparison
OW849370.1 See Comparison
NZ_CP064657.1 See Comparison
NZ_CP099761.1 See Comparison
OW849458.1 See Comparison
NZ_CP041734.1 See Comparison
NZ_OP950833.1 See Comparison
NZ_OX442404.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore