Plasmid NZ_CP023528.1

Sequence

Nucleotide Information

Accession	NZ_CP023528.1
Description	Citrobacter koseri strain FDAARGOS_393 plasmid unnamed, complete sequence
Source	refseq
Topology	circular
Length	9195 bp
GC Content	0.55 %
Created at NCBI	Oct. 1, 2017

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Citrobacter koseri (545)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Citrobacter (544)
Species	Citrobacter_koseri (545)
Strain

Assembly

Genome Data Information

Accession	GCF_002393245.1
Assembly Coverage	17.56

Biosample

Curated Collection Information

Accession	7312437

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	Environment,UCC strain
Classification	material,organic
Host-associated Taxon

DISEASE

Original Query	Bacteremia
DOID/SYMP	Bacterial infectious disease (DOID:104 ) A disease by infectious agent that results_in infection, has_material_basis_in Bacteria. Has_material_basis_in: ['bacteria']

Visualization

Similar Plasmids

based on Mash distance

NZ_CP077780.1	See Comparison
CP018672.1	See Comparison
NC_009793.1	See Comparison
NZ_CP036445.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP024884.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP126795.1	See Comparison
CP128674.1	See Comparison
NZ_CP149998.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP142968.1	See Comparison
NZ_CP141567.1	See Comparison
CP052312.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052171.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052146.1	See Comparison
CP052210.1	See Comparison
CP052529.1	See Comparison
CP052355.1	See Comparison
CP052180.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
NZ_AP023457.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052305.1	See Comparison
CP052206.1	See Comparison
CP052238.1	See Comparison
NZ_CP070583.1	See Comparison
CP052548.1	See Comparison
CP052541.1	See Comparison
CP052536.1	See Comparison
CP052497.1	See Comparison
CP052486.1	See Comparison
CP052439.1	See Comparison
CP052447.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
NZ_LR890433.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_LR890709.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP101900.1	See Comparison
NZ_CP104376.1	See Comparison
OW849455.1	See Comparison
NZ_CP098344.1	See Comparison
OW959929.1	See Comparison
OW959912.1	See Comparison
OW967952.1	See Comparison
CP097398.1	See Comparison
OW849269.1	See Comparison
NZ_CP095135.1	See Comparison
NZ_CP083003.1	See Comparison
CP094916.1	See Comparison
CP094910.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP036445.1	See Comparison
NZ_CP077780.1	See Comparison
CP018672.1	See Comparison
NC_009793.1	See Comparison
CP088424.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP024884.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP023528.1	See Comparison
NZ_CP149998.1	See Comparison
NZ_CP126795.1	See Comparison
CP128674.1	See Comparison
CP052283.1	See Comparison
NZ_CP142968.1	See Comparison
CP052312.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP141567.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052548.1	See Comparison
CP052541.1	See Comparison
CP052536.1	See Comparison
CP052191.1	See Comparison
CP052210.1	See Comparison
CP052305.1	See Comparison
CP052529.1	See Comparison
CP052497.1	See Comparison
CP052486.1	See Comparison
CP052206.1	See Comparison
CP052439.1	See Comparison
CP052238.1	See Comparison
CP052447.1	See Comparison
CP052180.1	See Comparison
NZ_LR890709.1	See Comparison
CP052171.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052146.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
CP052355.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
NZ_CP070583.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_LR890433.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP104376.1	See Comparison
NZ_CP098344.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
OW959929.1	See Comparison
OW959912.1	See Comparison
OW967952.1	See Comparison
OW849455.1	See Comparison
CP097398.1	See Comparison
NZ_CP095135.1	See Comparison
OW849269.1	See Comparison
CP094916.1	See Comparison
CP094910.1	See Comparison
NZ_CP090938.1	See Comparison
CP088424.1	See Comparison
NZ_CP083003.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP077780.1	See Comparison
NZ_CP036445.1	See Comparison
NZ_CP032177.1	See Comparison
CP018672.1	See Comparison
NC_009793.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP126795.1	See Comparison
NZ_CP024884.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP149998.1	See Comparison
CP128674.1	See Comparison
NZ_CP142968.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP141567.1	See Comparison
CP052305.1	See Comparison
CP052312.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052548.1	See Comparison
CP052541.1	See Comparison
CP052536.1	See Comparison
CP052497.1	See Comparison
CP052206.1	See Comparison
CP052210.1	See Comparison
CP052238.1	See Comparison
CP052529.1	See Comparison
CP052486.1	See Comparison
NZ_CP070583.1	See Comparison
CP052439.1	See Comparison
CP052447.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
CP052355.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052180.1	See Comparison
CP052171.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052146.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_LR890433.1	See Comparison
NZ_LR890709.1	See Comparison
OW959912.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP104376.1	See Comparison
NZ_CP098344.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
OW967952.1	See Comparison
OW959929.1	See Comparison
OW849455.1	See Comparison
CP097398.1	See Comparison
OW849269.1	See Comparison
NZ_CP095135.1	See Comparison
CP094916.1	See Comparison
CP094910.1	See Comparison
CP088424.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP083003.1	See Comparison
NC_009793.1	See Comparison
CP018672.1	See Comparison
NZ_CP077780.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP036445.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP024884.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP126795.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP125141.1	See Comparison
CP128674.1	See Comparison
NZ_CP149998.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP070583.1	See Comparison
NZ_CP142968.1	See Comparison
CP052312.1	See Comparison
CP052210.1	See Comparison
CP052529.1	See Comparison
CP052180.1	See Comparison
CP052171.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052146.1	See Comparison
CP052548.1	See Comparison
CP052238.1	See Comparison
NZ_CP141567.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052541.1	See Comparison
CP052536.1	See Comparison
CP052497.1	See Comparison
CP052486.1	See Comparison
CP052439.1	See Comparison
CP052447.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
CP052355.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052305.1	See Comparison
CP052206.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_LR890433.1	See Comparison
NZ_LR890709.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_CP098344.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
NZ_CP104376.1	See Comparison
OW959929.1	See Comparison
OW959912.1	See Comparison
NZ_CP095135.1	See Comparison
CP097398.1	See Comparison
OW967952.1	See Comparison
OW849455.1	See Comparison
OW849269.1	See Comparison
NZ_CP089434.1	See Comparison
CP094916.1	See Comparison
CP094910.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP036445.1	See Comparison
CP088424.1	See Comparison
NZ_CP077780.1	See Comparison
NZ_CP083003.1	See Comparison
CP018672.1	See Comparison
NC_009793.1	See Comparison
NZ_CP126795.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP024884.1	See Comparison
CP128674.1	See Comparison
NZ_CP149998.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP141567.1	See Comparison
NZ_CP142968.1	See Comparison
NZ_LR890433.1	See Comparison
CP052497.1	See Comparison
CP052486.1	See Comparison
CP052439.1	See Comparison
CP052447.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
CP052355.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052305.1	See Comparison
CP052206.1	See Comparison
CP052238.1	See Comparison
NZ_CP070583.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052312.1	See Comparison
CP052210.1	See Comparison
CP052529.1	See Comparison
CP052180.1	See Comparison
CP052171.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052146.1	See Comparison
CP052548.1	See Comparison
CP052541.1	See Comparison
CP052536.1	See Comparison
NZ_LR890709.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
CP097398.1	See Comparison
NZ_CP104376.1	See Comparison
OW959929.1	See Comparison
OW959912.1	See Comparison
NZ_CP098344.1	See Comparison
OW967952.1	See Comparison
OW849455.1	See Comparison
NZ_CP095135.1	See Comparison
OW849269.1	See Comparison
CP094916.1	See Comparison
CP094910.1	See Comparison
CP088424.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP083003.1	See Comparison
CP018672.1	See Comparison
NZ_CP077780.1	See Comparison
CP128674.1	See Comparison
NZ_CP036445.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP024884.1	See Comparison
NC_009793.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP126795.1	See Comparison
NZ_CP142968.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP149998.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP141567.1	See Comparison
NZ_MF150119.1	See Comparison
CP052312.1	See Comparison
CP052497.1	See Comparison
CP052210.1	See Comparison
CP052486.1	See Comparison
CP052439.1	See Comparison
CP052529.1	See Comparison
CP052180.1	See Comparison
CP052447.1	See Comparison
CP052424.1	See Comparison
CP052171.1	See Comparison
CP052513.1	See Comparison
CP052166.1	See Comparison
CP052355.1	See Comparison
CP052161.1	See Comparison
CP052396.1	See Comparison
CP052146.1	See Comparison
CP052318.1	See Comparison
CP052548.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052541.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052536.1	See Comparison
CP052305.1	See Comparison
NZ_LR890433.1	See Comparison
CP052206.1	See Comparison
CP052238.1	See Comparison
NZ_CP070583.1	See Comparison
NZ_LR890709.1	See Comparison
OW959929.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_OP378606.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
NZ_CP104376.1	See Comparison
NZ_CP098344.1	See Comparison
OW959912.1	See Comparison
OW967952.1	See Comparison
OW849455.1	See Comparison
CP097398.1	See Comparison
CP094916.1	See Comparison
NZ_CP095135.1	See Comparison
OW849269.1	See Comparison
CP094910.1	See Comparison
NZ_CP083003.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP077780.1	See Comparison
CP088424.1	See Comparison
NZ_CP036445.1	See Comparison
CP018672.1	See Comparison
NC_009793.1	See Comparison
NZ_CP022921.1	See Comparison
NZ_CP022075.1	See Comparison
NZ_CP032177.1	See Comparison
NZ_CP026710.1	See Comparison
NZ_CP137367.1	See Comparison
NZ_CP024884.1	See Comparison
NZ_CP126795.1	See Comparison
NZ_CP149998.1	See Comparison
CP128674.1	See Comparison
NZ_CP141567.1	See Comparison
NZ_CP125141.1	See Comparison
NZ_CP125171.1	See Comparison
NZ_CP142968.1	See Comparison
CP052312.1	See Comparison
NZ_MF150124.1	See Comparison
NZ_MF150119.1	See Comparison
CP052210.1	See Comparison
CP052529.1	See Comparison
CP052180.1	See Comparison
CP052439.1	See Comparison
CP052171.1	See Comparison
CP052447.1	See Comparison
CP052166.1	See Comparison
CP052161.1	See Comparison
CP052424.1	See Comparison
CP052513.1	See Comparison
CP052146.1	See Comparison
CP052548.1	See Comparison
CP052355.1	See Comparison
CP052396.1	See Comparison
CP052318.1	See Comparison
CP052541.1	See Comparison
CP052360.1	See Comparison
CP052234.1	See Comparison
CP052283.1	See Comparison
CP052191.1	See Comparison
CP052305.1	See Comparison
CP052536.1	See Comparison
CP052206.1	See Comparison
CP052497.1	See Comparison
CP052238.1	See Comparison
CP052486.1	See Comparison
NZ_AP023457.1	See Comparison
NZ_CP070583.1	See Comparison
NZ_LR890433.1	See Comparison
NZ_LR890709.1	See Comparison
NZ_CP098344.1	See Comparison
NZ_CP099262.1	See Comparison
NZ_CP046650.1	See Comparison
NZ_CP053362.1	See Comparison
NZ_CP048782.1	See Comparison
NZ_CP048804.1	See Comparison
NZ_CP101894.1	See Comparison
NZ_CP101900.1	See Comparison
NZ_CP104376.1	See Comparison
NZ_CP066091.1	See Comparison
NZ_CP061395.1	See Comparison
NZ_OP378606.1	See Comparison
OW967952.1	See Comparison
OW959929.1	See Comparison
OW959912.1	See Comparison
CP094916.1	See Comparison
CP097398.1	See Comparison
NZ_CP095135.1	See Comparison
OW849455.1	See Comparison
OW849269.1	See Comparison
CP094910.1	See Comparison
CP088424.1	See Comparison
NZ_CP090938.1	See Comparison
NZ_CP089434.1	See Comparison
NZ_CP083003.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore

Detected typing markers by plasmidfinder

NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2
NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2