Plasmid NZ_CP020056.1

Sequence

Nucleotide Information

Accession	NZ_CP020056.1
Description	Escherichia coli strain AR_0069 plasmid unitig_2, complete sequence
Source	refseq
Topology	circular
Length	136975 bp
GC Content	0.52 %
Created at NCBI	March 23, 2017

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_002056145.1
Assembly Coverage	147

Biosample

Curated Collection Information

Accession	4014910

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

NZ_CP020057.1

Similar Plasmids

based on Mash distance

NZ_MZ546616.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_CP087274.1	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_CP018817.1	See Comparison
NZ_CP015835.1	See Comparison
NZ_CP006661.1	See Comparison
NC_019158.1	See Comparison
NZ_CP022126.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
NZ_CP142096.1	See Comparison
NZ_OQ750828.1	See Comparison
NZ_CP132611.1	See Comparison
PP622803.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MH995507.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_CP117223.1	See Comparison
NZ_MZ546616.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_CP087274.1	See Comparison
NZ_CP018817.1	See Comparison
NZ_CP006661.1	See Comparison
NZ_CP015835.1	See Comparison
NZ_CP022126.1	See Comparison
NC_019158.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
PP622803.1	See Comparison
NZ_CP132611.1	See Comparison
NZ_OQ750828.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_CP142096.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_MH995507.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_CP117223.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_MZ546616.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_CP015835.1	See Comparison
NZ_CP087274.1	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_CP018817.1	See Comparison
NC_019158.1	See Comparison
NZ_CP006661.1	See Comparison
PP622803.1	See Comparison
NZ_CP022126.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
NZ_CP132611.1	See Comparison
NZ_OQ750828.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_CP142096.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_MH995507.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_CP087274.1	See Comparison
NZ_CP117223.1	See Comparison
NZ_MZ546616.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_CP018817.1	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_CP015835.1	See Comparison
NZ_CP006661.1	See Comparison
NZ_CP132611.1	See Comparison
NC_019158.1	See Comparison
NZ_CP022126.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
NZ_OQ750828.1	See Comparison
NZ_MH995507.1	See Comparison
PP622803.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_CP142096.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_CP117223.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_MZ546616.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP087274.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_CP018817.1	See Comparison
NZ_CP015835.1	See Comparison
NC_019158.1	See Comparison
NZ_CP006661.1	See Comparison
NZ_CP022126.1	See Comparison
NZ_CP132611.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
PP622803.1	See Comparison
NZ_OQ750828.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_CP142096.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MH995507.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_CP117223.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_MZ606384.2	See Comparison
NZ_MZ546616.1	See Comparison
NZ_OK500123.1	See Comparison
NZ_OL389795.1	See Comparison
NZ_CP087274.1	See Comparison
NZ_CP090205.1	See Comparison
NZ_CP021936.1	See Comparison
NZ_CP020056.1	See Comparison
NZ_CP018817.1	See Comparison
NZ_CP015835.1	See Comparison
NZ_CP050164.1	See Comparison
NZ_CP006661.1	See Comparison
NZ_CP096368.1	See Comparison
NZ_CP096321.1	See Comparison
NZ_CP096331.1	See Comparison
NZ_CP096329.1	See Comparison
NZ_CP096324.1	See Comparison
NZ_CP096327.1	See Comparison
NZ_CP142096.1	See Comparison
NC_019158.1	See Comparison
NZ_CP022126.1	See Comparison
NZ_CP132611.1	See Comparison
NZ_OQ750828.1	See Comparison
PP622803.1	See Comparison
NZ_MH995506.1	See Comparison
NZ_MK123268.1	See Comparison
NZ_MH263652.1	See Comparison
NZ_MK123267.1	See Comparison
NZ_MH995507.1	See Comparison
NZ_MK041212.1	See Comparison
NZ_MH995508.1	See Comparison
NZ_KX786648.1	See Comparison
NZ_CP107062.1	See Comparison
NZ_KU726616.1	See Comparison
NZ_MN310375.1	See Comparison
NZ_MN603981.1	See Comparison
NZ_CP117223.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore