Plasmid NZ_AP022101.1

Sequence

Nucleotide Information

Accession NZ_AP022101.1
Description Escherichia coli strain WP4-S18-ESBL-09 plasmid pWP4-S18-ESBL-09_3, complete sequence
Source refseq
Topology circular
Length 4063 bp
GC Content 0.51 %
Created at NCBI Aug. 13, 2020



Assembly

Genome Data Information

Accession GCF_014169175.1
Assembly Coverage 224


Biosample

Curated Collection Information
Accession 15592008

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 35.6514N;139.4813E
Original Query Type coordinates
Coordinates (Lat/Lon) 35.65/139.48
Address Kawasaki-kaido Ave., 大丸, Inagi, Tokyo, 206-0803, Japan

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP103473.1 See Comparison
NZ_CP093233.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP055172.1 See Comparison
NZ_CP107177.1 See Comparison
NZ_CP018972.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_CP124871.1 See Comparison
NZ_CP103473.1 See Comparison
CP125049.1 See Comparison
NZ_CP142936.1 See Comparison
CP056360.1 See Comparison
NZ_AP021949.1 See Comparison
NZ_CP093233.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP055172.1 See Comparison
NZ_CP018972.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_CP107177.1 See Comparison
NZ_CP055172.1 See Comparison
CP125049.1 See Comparison
CP056360.1 See Comparison
NZ_AP021949.1 See Comparison
NZ_CP124871.1 See Comparison
NZ_CP142936.1 See Comparison
NZ_CP103473.1 See Comparison
NZ_CP093233.1 See Comparison
NZ_CP124871.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_CP107177.1 See Comparison
NZ_CP018972.1 See Comparison
CP125049.1 See Comparison
NZ_CP142936.1 See Comparison
NZ_AP021949.1 See Comparison
CP056360.1 See Comparison
NZ_CP103473.1 See Comparison
NZ_CP124871.1 See Comparison
NZ_CP093233.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP107177.1 See Comparison
CP125049.1 See Comparison
NZ_CP055172.1 See Comparison
NZ_CP018972.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_AP021949.1 See Comparison
NZ_CP142936.1 See Comparison
CP056360.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP103473.1 See Comparison
NZ_CP093233.1 See Comparison
NZ_CP055172.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_CP107177.1 See Comparison
NZ_CP018972.1 See Comparison
NZ_CP124871.1 See Comparison
CP125049.1 See Comparison
NZ_CP055172.1 See Comparison
NZ_CP142936.1 See Comparison
NZ_CP093233.1 See Comparison
CP056360.1 See Comparison
NZ_AP022101.1 See Comparison
NZ_AP021949.1 See Comparison
NZ_CP103473.1 See Comparison
NZ_CP018972.1 See Comparison
NZ_CP054167.1 See Comparison
NZ_CP107177.1 See Comparison
NZ_CP132732.1 See Comparison
NZ_AP021949.1 See Comparison
NZ_CP124871.1 See Comparison
CP125049.1 See Comparison
NZ_CP142936.1 See Comparison
CP056360.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore