Plasmid NC_010428.1

Sequence

Nucleotide Information

Accession	NC_010428.1
Description	Staphylococcus aureus plasmid pKH14, complete sequence
Source	refseq
Topology	circular
Length	3124 bp
GC Content	0.29 %
Created at NCBI	March 25, 2008

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Staphylococcus aureus (1280)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Bacillales (1385)
Family	Staphylococcaceae (90964)
Genus	Staphylococcus (1279)
Species	Staphylococcus_aureus (1280)
Strain

Biosample

Curated Collection Information

Accession	14225741

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Similar Plasmids

based on Mash distance

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NZ_CP120178.1	See Comparison
NZ_CP120059.1	See Comparison
NZ_CP129354.1	See Comparison
NZ_CP129359.1	See Comparison
NZ_CP120124.1	See Comparison
NZ_CP120055.1	See Comparison
NZ_CP120145.1	See Comparison
NZ_CP120049.1	See Comparison
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NZ_CP120072.1	See Comparison
NZ_CP120032.1	See Comparison
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NZ_CP120120.1	See Comparison
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NZ_CP120113.1	See Comparison
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NZ_CP120117.1	See Comparison
NZ_CP120172.1	See Comparison
NZ_CP120127.1	See Comparison
NZ_CP120154.1	See Comparison
NZ_CP120040.1	See Comparison
NZ_CP120164.1	See Comparison
NZ_CP120049.1	See Comparison
NZ_CP120184.1	See Comparison
NZ_CP120043.1	See Comparison
NZ_CP120046.1	See Comparison
NZ_CP120092.1	See Comparison
NZ_CP120178.1	See Comparison
NZ_CP120110.1	See Comparison
NZ_CP103849.1	See Comparison
NZ_CP129354.1	See Comparison
NZ_CP129359.1	See Comparison
NZ_CP120124.1	See Comparison
NZ_CP120035.1	See Comparison
NZ_CP120072.1	See Comparison
NZ_CP120032.1	See Comparison
NZ_CP120136.1	See Comparison
NZ_CP120052.1	See Comparison
NZ_CP120203.1	See Comparison
NZ_CP120019.1	See Comparison
NZ_CP120169.1	See Comparison
NZ_CP120098.1	See Comparison
NZ_CP120120.1	See Comparison
NZ_CP120081.1	See Comparison
NZ_CP120059.1	See Comparison
NZ_CP120113.1	See Comparison
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NZ_CP120178.1	See Comparison
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NZ_CP120055.1	See Comparison
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NZ_CP120120.1	See Comparison
NZ_CP120081.1	See Comparison
NZ_CP120113.1	See Comparison
NZ_CP120176.1	See Comparison
NZ_CP120142.1	See Comparison
NZ_CP120095.1	See Comparison
NZ_CP120117.1	See Comparison
NZ_CP120172.1	See Comparison
NZ_CP120127.1	See Comparison
NZ_CP120154.1	See Comparison
NZ_CP120040.1	See Comparison
NZ_CP120164.1	See Comparison
NZ_CP120184.1	See Comparison
NZ_CP120043.1	See Comparison
NZ_CP120046.1	See Comparison
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NZ_CP120124.1	See Comparison
NZ_CP120055.1	See Comparison
NZ_CP120169.1	See Comparison
NZ_CP120098.1	See Comparison
NZ_CP120120.1	See Comparison
NZ_CP120081.1	See Comparison
NZ_CP120113.1	See Comparison
NZ_CP120176.1	See Comparison
NZ_CP120142.1	See Comparison
NZ_CP120095.1	See Comparison
NZ_CP120117.1	See Comparison
NZ_CP120172.1	See Comparison
NZ_CP120127.1	See Comparison
NZ_CP120154.1	See Comparison
NZ_CP120040.1	See Comparison
NZ_CP120164.1	See Comparison
NZ_CP120184.1	See Comparison
NZ_CP120145.1	See Comparison
NZ_CP120043.1	See Comparison
NZ_CP120046.1	See Comparison
NZ_CP120092.1	See Comparison
NZ_CP120178.1	See Comparison
NZ_CP120110.1	See Comparison
NZ_CP120049.1	See Comparison
NZ_CP120035.1	See Comparison
NZ_CP120072.1	See Comparison
NZ_CP120032.1	See Comparison
NZ_CP120136.1	See Comparison
NZ_CP120052.1	See Comparison
NZ_CP120203.1	See Comparison
NZ_CP120019.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore

Detected typing markers by plasmidfinder

NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2
NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2