Plasmid LR890734.1

Sequence

Nucleotide Information

Accession LR890734.1
Description Klebsiella pneumoniae isolate INF102-sc-2279897 genome assembly, plasmid: 9
Source insd
Topology circular
Length 1919 bp
GC Content 0.51 %
Created at NCBI Oct. 30, 2020



Biosample

Curated Collection Information
Accession 4042581

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Australia
Original Query Type name
Coordinates (Lat/Lon) -24.78/134.76
Address Australia

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP101929.1 See Comparison
NZ_CP081014.1 See Comparison
NZ_CP011585.1 See Comparison
CP011625.1 See Comparison
NZ_CP149504.1 See Comparison
NZ_CP066148.1 See Comparison
NZ_CP055516.1 See Comparison
LR890747.1 See Comparison
LR890594.1 See Comparison
NZ_CP117234.1 See Comparison
NZ_CP101929.1 See Comparison
NZ_CP081014.1 See Comparison
NZ_CP066148.1 See Comparison
NZ_CP149504.1 See Comparison
NZ_CP011585.1 See Comparison
CP011625.1 See Comparison
NZ_CP055516.1 See Comparison
NZ_CP081014.1 See Comparison
LR890747.1 See Comparison
LR890734.1 See Comparison
LR890594.1 See Comparison
NZ_CP117234.1 See Comparison
NZ_CP101929.1 See Comparison
NZ_CP066148.1 See Comparison
NZ_CP011585.1 See Comparison
CP011625.1 See Comparison
NZ_CP149504.1 See Comparison
NZ_CP055516.1 See Comparison
NZ_CP117234.1 See Comparison
LR890747.1 See Comparison
LR890594.1 See Comparison
NZ_CP101929.1 See Comparison
NZ_CP066148.1 See Comparison
NZ_CP149504.1 See Comparison
NZ_CP081014.1 See Comparison
NZ_CP011585.1 See Comparison
CP011625.1 See Comparison
NZ_CP055516.1 See Comparison
NZ_CP011585.1 See Comparison
LR890747.1 See Comparison
LR890594.1 See Comparison
NZ_CP101929.1 See Comparison
NZ_CP081014.1 See Comparison
NZ_CP117234.1 See Comparison
CP011625.1 See Comparison
NZ_CP149504.1 See Comparison
LR890747.1 See Comparison
NZ_CP055516.1 See Comparison
NZ_CP066148.1 See Comparison
LR890594.1 See Comparison
NZ_CP117234.1 See Comparison
NZ_CP101929.1 See Comparison
NZ_CP149504.1 See Comparison
NZ_CP081014.1 See Comparison
NZ_CP011585.1 See Comparison
CP011625.1 See Comparison
NZ_CP066148.1 See Comparison
NZ_CP055516.1 See Comparison
LR890747.1 See Comparison
LR890594.1 See Comparison
NZ_CP117234.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore