Plasmid CP081142.1

Sequence

Nucleotide Information

Accession CP081142.1
Description Acinetobacter baumannii strain ARLG_6344 plasmid pARLG_6344_3
Source insd
Topology linear
Length 10967 bp
GC Content 0.37 %
Created at NCBI Aug. 26, 2021



Assembly

Genome Data Information

Accession GCA_014881055.2
Assembly Coverage 94


Biosample

Curated Collection Information
Accession 16351130

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 41.50N;81.62W
Original Query Type coordinates
Coordinates (Lat/Lon) 41.50/-81.62
Address Cleveland Clinic, 9500, Euclid Avenue, Fairfax, Cleveland, Cuyahoga County, Ohio, 44195, United States

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP106990.1 See Comparison
CP081142.1 See Comparison
CP081147.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP040427.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
CP031745.1 See Comparison
NZ_CP096898.1 See Comparison
NZ_KM051986.1 See Comparison
NZ_CP050434.1 See Comparison
CP081147.1 See Comparison
NZ_CP106990.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP040427.1 See Comparison
CP031745.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
NZ_CP096898.1 See Comparison
NZ_KM051986.1 See Comparison
NZ_CP050434.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP040427.1 See Comparison
CP081147.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP106990.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
NZ_KM051986.1 See Comparison
CP031745.1 See Comparison
NZ_CP096898.1 See Comparison
NZ_CP050434.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP106990.1 See Comparison
CP081147.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_KM051986.1 See Comparison
CP031745.1 See Comparison
NZ_CP096898.1 See Comparison
NZ_CP040427.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
NZ_CP050434.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP040427.1 See Comparison
NZ_CP106990.1 See Comparison
NZ_CP041589.1 See Comparison
CP081147.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
NZ_CP096898.1 See Comparison
CP031745.1 See Comparison
NZ_KM051986.1 See Comparison
NZ_CP050434.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP067103.1 See Comparison
CP081147.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP106990.1 See Comparison
NZ_CP040427.1 See Comparison
NZ_CP035053.1 See Comparison
NZ_CP096898.1 See Comparison
CP031745.1 See Comparison
NZ_CP050434.1 See Comparison
NZ_KM051986.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP040427.1 See Comparison
NZ_CP106990.1 See Comparison
CP081147.1 See Comparison
NZ_CP041589.1 See Comparison
NZ_CP035048.1 See Comparison
NZ_CP035053.1 See Comparison
CP031745.1 See Comparison
NZ_KM051986.1 See Comparison
NZ_CP067103.1 See Comparison
NZ_CP102582.1 See Comparison
NZ_CP096898.1 See Comparison
NZ_CP050434.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2