Plasmid CP077391.1

Sequence

Nucleotide Information

Accession CP077391.1
Description Escherichia coli strain FDAARGOS 1375 plasmid unnamed2, complete sequence
Source insd
Topology circular
Length 5153 bp
GC Content 0.46 %
Created at NCBI June 28, 2021



Assembly

Genome Data Information

Accession GCA_019048605.1
Assembly Coverage 1124.5


Biosample

Curated Collection Information
Accession 16357517

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,MT
Original Query Type name
Coordinates (Lat/Lon) 47.38/-109.64
Address USA,MT

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP119453.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_CP147589.1 See Comparison
NZ_CP051704.1 See Comparison
NC_013589.1 See Comparison
NZ_CP053386.1 See Comparison
NZ_CP074490.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
CP048872.1 See Comparison
NZ_CP120565.1 See Comparison
CP077316.1 See Comparison
NZ_CP119453.1 See Comparison
NC_018996.1 See Comparison
NZ_CP147589.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP074490.1 See Comparison
NZ_CP051704.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
CP048872.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_CP053386.1 See Comparison
NZ_CP120565.1 See Comparison
NC_018996.1 See Comparison
CP077316.1 See Comparison
NC_013589.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_CP119453.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP147589.1 See Comparison
NZ_CP074490.1 See Comparison
NZ_CP051704.1 See Comparison
CP048872.1 See Comparison
NZ_CP120565.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
NZ_CP053386.1 See Comparison
CP077391.1 See Comparison
CP077316.1 See Comparison
NC_018996.1 See Comparison
NZ_CP119453.1 See Comparison
NC_013589.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP147589.1 See Comparison
CP048872.1 See Comparison
NZ_CP051704.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
NZ_CP074490.1 See Comparison
NZ_CP053386.1 See Comparison
NZ_CP120565.1 See Comparison
NC_018996.1 See Comparison
CP077316.1 See Comparison
NZ_CP119453.1 See Comparison
NC_013589.1 See Comparison
NZ_CP053386.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_CP147589.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP051704.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
CP048872.1 See Comparison
CP077316.1 See Comparison
NZ_CP120565.1 See Comparison
NZ_CP074490.1 See Comparison
NZ_CP119453.1 See Comparison
NC_013589.1 See Comparison
NC_018996.1 See Comparison
CP048872.1 See Comparison
NZ_OZ039049.1 See Comparison
NZ_CP051704.1 See Comparison
NZ_CP069896.1 See Comparison
NZ_CP069938.1 See Comparison
NZ_CP124402.1 See Comparison
NZ_CP147580.1 See Comparison
NZ_CP147589.1 See Comparison
NC_018996.1 See Comparison
NZ_CP053386.1 See Comparison
NZ_CP120565.1 See Comparison
NZ_CP074490.1 See Comparison
CP077316.1 See Comparison
NC_013589.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore