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v. 2024_05_31_v2
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Typing
Plasmid CP064280.1
Sequence
Nucleotide Information
Accession
CP064280.1
Description
Enterococcus faecium strain Cairo plasmid pEFAEC_CAIRO_1, complete sequence
Source
insd
Topology
circular
Length
2067 bp
GC Content
0.39 %
Created at NCBI
Nov. 12, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterococcus faecium (1352)
Lineage
Superkingdom
Bacteria (2)
Phylum
Bacillota (1239)
Class
Bacilli (91061)
Order
Lactobacillales (186826)
Family
Enterococcaceae (81852)
Genus
Enterococcus (1350)
Species
Enterococcus_faecium (1352)
Strain
Assembly
Genome Data Information
Accession
GCA_015356095.1
Assembly Coverage
46
Biosample
Curated Collection Information
Accession
16574827
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Egypt,Cairo
Original Query Type
name
Coordinates (Lat/Lon)
30.05/31.24
Address
Egypt,Cairo
ECOSYSTEM
Original Query
Homo sapiens,cell culture,clinical isolate
Classification
cell_culture,host_associated,material,organic
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Expand all
Plasmids from same Biosample
CP064291.1
CP064290.1
CP064289.1
CP064288.1
CP064287.1
CP064286.1
CP064285.1
CP064284.1
CP064283.1
CP064282.1
CP064281.1
Similar Plasmids
based on Mash distance
NZ_CP064431.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP066420.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP064431.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP066420.1
See Comparison
CP064280.1
See Comparison
NZ_CP064431.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP064431.1
See Comparison
NZ_CP066420.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP066420.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP064431.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
NZ_CP066450.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP066420.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP064431.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066456.1
See Comparison
NZ_CP066442.1
See Comparison
NZ_CP066433.1
See Comparison
NZ_CP066485.1
See Comparison
NZ_CP066472.1
See Comparison
NZ_CP066420.1
See Comparison
NZ_CP065935.1
See Comparison
NZ_CP065553.1
See Comparison
NZ_CP066646.1
See Comparison
NZ_CP066582.1
See Comparison
NZ_CP066584.1
See Comparison
NZ_CP066575.1
See Comparison
NZ_CP066644.1
See Comparison
NZ_CP066628.1
See Comparison
NZ_CP066621.1
See Comparison
NZ_CP066607.1
See Comparison
NZ_CP066414.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
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Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore