Plasmid OW969945.1

Sequence

Nucleotide Information

Accession OW969945.1
Description Klebsiella pneumoniae isolate 11 genome assembly, plasmid: P7
Source insd
Topology circular
Length 5250 bp
GC Content 0.40 %
Created at NCBI May 20, 2022



Assembly

Genome Data Information

Accession GCA_905337985.2
Assembly Coverage 243


Biosample

Curated Collection Information
Accession 22317002

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Complejo Hospitalario Universitario de A Coruna (A Coruna)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

OW969945.1 See Comparison


Plasmid Visualization

JSON GENBANK

SourceElement Name Display Sequence Favorite
PGAGhypothetical proteincopy
PGAGhypothetical proteincopy
PGAGhypothetical proteincopy
PGAGhypothetical proteincopy
PGAGReplication initiation proteincopy
SourceElement NameDisplaySequenceFavorite
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Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process
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NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACCReplicon TypeRelaxase TypeMPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank
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NUCCORE ACCReplicon TypeRelaxase TypeMPF TypeOriT TypePredicted MobilityPrimary Cluster IDSecondary Cluster IDObserved Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank




BLAST results of detected typing markers by MOB-type
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
No data available in table
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
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Detected typing markers by plasmidfinder
NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2
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NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2