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v. 2024_05_31_v2
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Typing
Plasmid NZ_OY754391.1
Sequence
Nucleotide Information
Accession
NZ_OY754391.1
Description
Escherichia coli isolate F637 plasmid pF637-2, complete sequence
Source
refseq
Topology
circular
Length
5429 bp
GC Content
0.51 %
Created at NCBI
Oct. 27, 2023
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_963575425.1
Assembly Coverage
60
Biosample
Curated Collection Information
Accession
35792007
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
France
Original Query Type
name
Coordinates (Lat/Lon)
46.60/1.89
Address
France
ECOSYSTEM
Original Query
broiler
Classification
host_associated
Host-associated Taxon
Gallus gallus (
9031
)
Host-associated Age
6
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_OY754390.1
Similar Plasmids
based on Mash distance
NZ_CP091562.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP091562.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_OY754391.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_CP091562.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_CP091562.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
NZ_CP091562.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP091562.1
See Comparison
NZ_OY754419.1
See Comparison
NZ_AP022485.1
See Comparison
NZ_CP054982.1
See Comparison
NZ_CP122861.1
See Comparison
NZ_CP122850.1
See Comparison
NZ_OQ401025.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore