Plasmid NZ_OX291535.1

Sequence

Nucleotide Information

Accession NZ_OX291535.1
Description Serratia marcescens strain SJC1046 plasmid 4, complete sequence
Source refseq
Topology circular
Length 12879 bp
GC Content 0.59 %
Created at NCBI Aug. 23, 2022



Assembly

Genome Data Information

Accession GCF_946406225.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 28896707

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query United Kingdom
Original Query Type name
Coordinates (Lat/Lon) 54.70/-3.28
Address United Kingdom

ECOSYSTEM
Original Query Homo sapiens,Bloodstream
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query not known
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_OX291476.1 See Comparison
NZ_OX291587.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_OX291706.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OW849158.1 See Comparison
OX291689.1 See Comparison
OX291612.1 See Comparison
NZ_OW849494.1 See Comparison
OX291689.1 See Comparison
NZ_CP096191.1 See Comparison
NZ_OX291476.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OX291587.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_OX291706.1 See Comparison
OX291612.1 See Comparison
NZ_CP096191.1 See Comparison
NZ_OW849158.1 See Comparison
NZ_OW849494.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_OX291706.1 See Comparison
NZ_OW849158.1 See Comparison
NZ_OX291476.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OX291587.1 See Comparison
OX291689.1 See Comparison
OX291612.1 See Comparison
NZ_OW849494.1 See Comparison
OX291689.1 See Comparison
NZ_OX291476.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OX291587.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291535.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_CP096191.1 See Comparison
NZ_OX291706.1 See Comparison
OX291612.1 See Comparison
NZ_CP096191.1 See Comparison
NZ_CP096191.1 See Comparison
OX291689.1 See Comparison
OX291612.1 See Comparison
NZ_OW849158.1 See Comparison
NZ_OW849494.1 See Comparison
NZ_OW849158.1 See Comparison
NZ_OW849494.1 See Comparison
NZ_OX291476.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OX291587.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_OX291706.1 See Comparison
NZ_OW849494.1 See Comparison
NZ_OX291476.1 See Comparison
NZ_OX291471.1 See Comparison
NZ_OX291529.1 See Comparison
NZ_OX291587.1 See Comparison
NZ_OX291537.1 See Comparison
NZ_OW849158.1 See Comparison
NZ_OX291747.1 See Comparison
NZ_OX291772.1 See Comparison
NZ_OX291726.1 See Comparison
NZ_OX291797.1 See Comparison
NZ_OX291706.1 See Comparison
OX291689.1 See Comparison
OX291612.1 See Comparison
NZ_CP096191.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore