Plasmid NZ_OW967803.1

Sequence

Nucleotide Information

Accession NZ_OW967803.1
Description Escherichia coli isolate 410 plasmid P1, complete sequence
Source refseq
Topology circular
Length 109109 bp
GC Content 0.52 %
Created at NCBI May 19, 2022



Assembly

Genome Data Information

Accession GCF_905330145.2
Assembly Coverage 418


Biosample

Curated Collection Information
Accession 22316779

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Hospital Clinic (Barcelona)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_AP023225.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_AP019191.1 See Comparison
LC613142.1 See Comparison
NZ_CP116901.1 See Comparison
NZ_CP048916.1 See Comparison
NZ_CP024805.1 See Comparison
NZ_CP026474.1 See Comparison
LC521844.1 See Comparison
NZ_CP123037.1 See Comparison
NZ_CP123025.1 See Comparison
NZ_CP123014.1 See Comparison
NZ_AP023225.1 See Comparison
LC807796.1 See Comparison
LC521844.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_AP019191.1 See Comparison
LC613142.1 See Comparison
NZ_CP048916.1 See Comparison
NZ_CP116901.1 See Comparison
NZ_CP026474.1 See Comparison
NZ_AP019191.1 See Comparison
NZ_CP024805.1 See Comparison
NZ_AP023225.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_CP123037.1 See Comparison
NZ_CP123014.1 See Comparison
NZ_CP123025.1 See Comparison
LC807796.1 See Comparison
NZ_CP048916.1 See Comparison
LC613142.1 See Comparison
NZ_CP116901.1 See Comparison
NZ_CP024805.1 See Comparison
LC521844.1 See Comparison
NZ_CP026474.1 See Comparison
LC807796.1 See Comparison
NZ_CP123037.1 See Comparison
NZ_CP123014.1 See Comparison
NZ_CP123025.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_AP023225.1 See Comparison
NZ_AP019191.1 See Comparison
NZ_CP048916.1 See Comparison
LC613142.1 See Comparison
NZ_CP116901.1 See Comparison
NZ_OW967803.1 See Comparison
NZ_CP026474.1 See Comparison
LC521844.1 See Comparison
NZ_CP123037.1 See Comparison
NZ_CP024805.1 See Comparison
NZ_CP123014.1 See Comparison
NZ_CP123025.1 See Comparison
NZ_CP116901.1 See Comparison
LC807796.1 See Comparison
LC613142.1 See Comparison
NZ_AP023225.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_AP019191.1 See Comparison
LC521844.1 See Comparison
NZ_CP048916.1 See Comparison
LC807796.1 See Comparison
NZ_CP024805.1 See Comparison
NZ_CP026474.1 See Comparison
NZ_CP123037.1 See Comparison
NZ_CP123014.1 See Comparison
NZ_CP123025.1 See Comparison
NZ_AP023225.1 See Comparison
NZ_MG702492.1 See Comparison
NZ_AP019191.1 See Comparison
NZ_CP048916.1 See Comparison
LC613142.1 See Comparison
NZ_CP116901.1 See Comparison
NZ_CP123037.1 See Comparison
LC521844.1 See Comparison
NZ_CP026474.1 See Comparison
NZ_CP024805.1 See Comparison
NZ_CP123025.1 See Comparison
NZ_CP123014.1 See Comparison
LC807796.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore