Plasmid NZ_KU578314.1

Sequence

Nucleotide Information

Accession NZ_KU578314.1
Description Pseudomonas aeruginosa strain 10265 plasmid p10265-KPC, complete sequence
Source refseq
Topology circular
Length 38939 bp
GC Content 0.58 %
Created at NCBI June 3, 2020



Biosample

Curated Collection Information
Accession 14227261

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China
Original Query Type name
Coordinates (Lat/Lon) 34.41/86.03
Address China

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_MH909350.1 See Comparison
NZ_MH909348.1 See Comparison
NZ_AP022253.1 See Comparison
NZ_MN477223.1 See Comparison
NZ_CP118700.1 See Comparison
NZ_OW848790.1 See Comparison
NZ_OW969914.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
OW969796.1 See Comparison
OW970313.1 See Comparison
OW969787.1 See Comparison
NZ_AP019194.1 See Comparison
OW969903.1 See Comparison
OW969864.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
NZ_CP026224.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_MH909350.1 See Comparison
NZ_MH909348.1 See Comparison
NZ_AP022253.1 See Comparison
NZ_MN477223.1 See Comparison
NZ_MH909350.1 See Comparison
NZ_OW848790.1 See Comparison
NZ_OW969914.1 See Comparison
OW970313.1 See Comparison
OW969903.1 See Comparison
OW969864.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
NZ_AP019194.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_CP026224.1 See Comparison
NZ_CP118700.1 See Comparison
OW969796.1 See Comparison
OW969787.1 See Comparison
NZ_MH909348.1 See Comparison
NZ_MN477223.1 See Comparison
NZ_AP022253.1 See Comparison
OW970313.1 See Comparison
NZ_CP118700.1 See Comparison
NZ_OW848790.1 See Comparison
NZ_OW969914.1 See Comparison
OW969903.1 See Comparison
OW969796.1 See Comparison
OW969787.1 See Comparison
OW969864.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
NZ_AP019194.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_OW848790.1 See Comparison
NZ_MH909350.1 See Comparison
NZ_MH909348.1 See Comparison
NZ_CP118700.1 See Comparison
NZ_CP026224.1 See Comparison
NZ_AP022253.1 See Comparison
NZ_MN477223.1 See Comparison
NZ_OW969914.1 See Comparison
NZ_AP019194.1 See Comparison
OW969903.1 See Comparison
OW969864.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
OW969796.1 See Comparison
OW969787.1 See Comparison
OW970313.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_MH909350.1 See Comparison
NZ_CP026224.1 See Comparison
NZ_MH909348.1 See Comparison
OW970313.1 See Comparison
NZ_AP022253.1 See Comparison
NZ_MN477223.1 See Comparison
NZ_OW848790.1 See Comparison
OW969903.1 See Comparison
OW969864.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
OW969796.1 See Comparison
NZ_KU578314.1 See Comparison
NZ_CP118700.1 See Comparison
NZ_OW969914.1 See Comparison
OW969787.1 See Comparison
NZ_CP026224.1 See Comparison
NZ_AP019194.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_CP118700.1 See Comparison
NZ_MH909350.1 See Comparison
NZ_MH909348.1 See Comparison
NZ_AP022253.1 See Comparison
NZ_MN477223.1 See Comparison
OW970313.1 See Comparison
NZ_OW848790.1 See Comparison
OW969856.1 See Comparison
OW969852.1 See Comparison
OW969826.1 See Comparison
OW969816.1 See Comparison
OW969809.1 See Comparison
OW969796.1 See Comparison
NZ_OW969914.1 See Comparison
OW969903.1 See Comparison
OW969787.1 See Comparison
OW969864.1 See Comparison
NZ_CP028566.1 See Comparison
NZ_AP019194.1 See Comparison
NZ_CP026224.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore