Plasmid NZ_CP149834.1

Sequence

Nucleotide Information

Accession NZ_CP149834.1
Description Acinetobacter baumannii strain 2024CK-00250 plasmid unnamed3, complete sequence
Source refseq
Topology circular
Length 14639 bp
GC Content 0.38 %
Created at NCBI March 25, 2024



Biosample

Curated Collection Information
Accession 40254323

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA
Original Query Type name
Coordinates (Lat/Lon) 39.78/-100.45
Address USA

ECOSYSTEM
Original Query Homo sapiens,sputum
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP131952.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_OP378603.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP061526.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP131952.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP061526.1 See Comparison
NZ_OP378603.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP131952.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP061526.1 See Comparison
NZ_OP378603.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP131952.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_CP061526.1 See Comparison
NZ_OP378603.1 See Comparison
NZ_CP131952.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP149834.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_CP131952.1 See Comparison
NZ_OP378603.1 See Comparison
NZ_CP061526.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_CP096819.1 See Comparison
NZ_CP061526.1 See Comparison
NZ_CP131952.1 See Comparison
NZ_OP378603.1 See Comparison
CP137928.1 See Comparison
CP137933.1 See Comparison
NZ_CP155479.1 See Comparison
NZ_CP155461.1 See Comparison
NZ_CP125224.1 See Comparison
NZ_CP125226.1 See Comparison
NZ_CP140433.1 See Comparison
NZ_CP143351.1 See Comparison
NZ_CP140437.1 See Comparison
NZ_OP378603.1 See Comparison
NZ_CP061526.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2