Plasmid NZ_CP147630.1

Sequence

Nucleotide Information

Accession NZ_CP147630.1
Description Klebsiella pneumoniae strain GN06034 plasmid unnamed2, complete sequence
Source refseq
Topology circular
Length 53322 bp
GC Content 0.50 %
Created at NCBI April 5, 2024



Assembly

Genome Data Information

Accession GCF_037287515.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 40123786

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 36.0070N;78.9371W
Original Query Type coordinates
Coordinates (Lat/Lon) 36.01/-78.94
Address Duke University Hospital, 2301, Erwin Road, Crest Street, Durham, Durham County, North Carolina, 27710, United States

ECOSYSTEM
Original Query Homo sapiens,bloodstream
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query bacterial infectious disease
DOID/SYMP
  • Bacterial infectious disease (DOID:104 )
    • A disease by infectious agent that results_in infection, has_material_basis_in Bacteria.
    • Has_material_basis_in: ['bacteria']

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
NZ_KU934011.1 See Comparison
NZ_KT362706.1 See Comparison
NZ_CP117736.1 See Comparison
NC_019384.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080663.1 See Comparison
CP080754.1 See Comparison
CP080732.1 See Comparison
CP080714.1 See Comparison
CP080728.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080705.1 See Comparison
CP080676.1 See Comparison
CP080659.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
NZ_KU934011.1 See Comparison
NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
NZ_KT362706.1 See Comparison
CP080663.1 See Comparison
NZ_CP117736.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080714.1 See Comparison
CP080728.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080705.1 See Comparison
CP080754.1 See Comparison
CP080676.1 See Comparison
CP080732.1 See Comparison
CP080659.1 See Comparison
NZ_CP117736.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
NZ_KU934011.1 See Comparison
NZ_KT362706.1 See Comparison
NC_019384.1 See Comparison
NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080663.1 See Comparison
CP080754.1 See Comparison
CP080732.1 See Comparison
CP080705.1 See Comparison
CP080714.1 See Comparison
CP080728.1 See Comparison
CP080676.1 See Comparison
CP080659.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
NZ_KU934011.1 See Comparison
NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
NC_019384.1 See Comparison
NZ_CP147630.1 See Comparison
CP080663.1 See Comparison
NZ_CP117736.1 See Comparison
NZ_KT362706.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080728.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080705.1 See Comparison
CP080676.1 See Comparison
CP080659.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
CP080754.1 See Comparison
CP080732.1 See Comparison
CP080714.1 See Comparison
NZ_CP117736.1 See Comparison
NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
NZ_KT362706.1 See Comparison
NC_019384.1 See Comparison
NZ_KU934011.1 See Comparison
CP080663.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080676.1 See Comparison
CP080659.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
CP080754.1 See Comparison
CP080732.1 See Comparison
CP080714.1 See Comparison
CP080728.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080705.1 See Comparison
NC_019384.1 See Comparison
NZ_KY659387.1 See Comparison
NZ_KY659388.1 See Comparison
NZ_KT362706.1 See Comparison
NZ_KU934011.1 See Comparison
CP067928.1 See Comparison
NZ_CP083703.1 See Comparison
CP080663.1 See Comparison
CP080754.1 See Comparison
CP080732.1 See Comparison
CP080714.1 See Comparison
CP080728.1 See Comparison
CP080724.1 See Comparison
CP080700.1 See Comparison
CP080740.1 See Comparison
CP080747.1 See Comparison
CP080709.1 See Comparison
CP080695.1 See Comparison
CP080736.1 See Comparison
CP080680.1 See Comparison
CP080705.1 See Comparison
CP080676.1 See Comparison
CP080659.1 See Comparison
NZ_CP117736.1 See Comparison
CP080686.1 See Comparison
CP080668.1 See Comparison
CP080672.1 See Comparison
NC_019384.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore