Plasmid NZ_CP146146.1

Sequence

Nucleotide Information

Accession NZ_CP146146.1
Description Klebsiella pneumoniae strain kp13 plasmid unnamedA, complete sequence
Source refseq
Topology circular
Length 126359 bp
GC Content 0.52 %
Created at NCBI April 5, 2024



Assembly

Genome Data Information

Accession GCF_037024145.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 39724762

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,kunming
Original Query Type name
Coordinates (Lat/Lon) 25.04/102.71
Address China,kunming

ECOSYSTEM
Original Query Homo sapiens,Microbial sequencing
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP079643.1 See Comparison
CP067711.1 See Comparison
NZ_CP072404.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070426.1 See Comparison
NZ_CP070431.1 See Comparison
CP067711.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP079643.1 See Comparison
NZ_CP072404.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP146161.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP146161.1 See Comparison
CP067711.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070426.1 See Comparison
NZ_CP070431.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP079643.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP072404.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP146161.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070426.1 See Comparison
NZ_CP070431.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP072404.1 See Comparison
CP067711.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP079643.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP146146.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP146161.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP070431.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070431.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070426.1 See Comparison
CP067711.1 See Comparison
NZ_CP072404.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP079643.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP146161.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP072404.1 See Comparison
CP067711.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070426.1 See Comparison
NZ_CP079637.1 See Comparison
NZ_CP079643.1 See Comparison
NZ_CP072414.1 See Comparison
NZ_CP072409.1 See Comparison
NZ_CP070460.1 See Comparison
NZ_CP146186.1 See Comparison
NZ_CP146161.1 See Comparison
NZ_CP146151.1 See Comparison
NZ_CP146176.1 See Comparison
NZ_CP146166.1 See Comparison
NZ_CP036321.1 See Comparison
NZ_CP146181.1 See Comparison
NZ_CP146156.1 See Comparison
NZ_CP146171.1 See Comparison
NZ_CP070411.1 See Comparison
NZ_CP070450.1 See Comparison
NZ_CP070416.1 See Comparison
NZ_CP070426.1 See Comparison
NZ_CP070446.1 See Comparison
NZ_CP070431.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore