Plasmid NZ_CP107414.1

Sequence

Nucleotide Information

Accession	NZ_CP107414.1
Description	Klebsiella pneumoniae strain CRKP_22 plasmid unnamed2, complete sequence
Source	refseq
Topology	circular
Length	146158 bp
GC Content	0.53 %
Created at NCBI	Feb. 2, 2023

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_028221225.1
Assembly Coverage	300

Biosample

Curated Collection Information

Accession	31207051

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	China,Wuhan
Original Query Type	name
Coordinates (Lat/Lon)	30.59/114.30
Address	China,Wuhan

ECOSYSTEM

Original Query	Homo sapiens,lavage fluid
Classification	bronchi,host_associated,respiratory_system
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	infection
DOID/SYMP	Disease infectious agent (DOID:0050117 ) A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP031720.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP031720.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP031720.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP031720.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison
NZ_CP031720.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP031720.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison
NZ_CP138529.1	See Comparison
NZ_CP107404.1	See Comparison
NZ_CP107520.1	See Comparison
NZ_CP107360.1	See Comparison
NZ_CP107505.1	See Comparison
NZ_CP107460.1	See Comparison
NZ_CP107475.1	See Comparison
NZ_CP107391.1	See Comparison
NZ_CP107443.1	See Comparison
NZ_CP107485.1	See Comparison
NZ_CP107438.1	See Comparison
NZ_CP107423.1	See Comparison
NZ_CP107414.1	See Comparison
NZ_CP107470.1	See Comparison
NZ_CP107480.1	See Comparison
NZ_CP107515.1	See Comparison
NZ_CP107400.1	See Comparison
NZ_CP107500.1	See Comparison
NZ_CP107510.1	See Comparison
NZ_CP107449.1	See Comparison
NZ_CP107395.1	See Comparison
NZ_CP107490.1	See Comparison
NZ_CP107495.1	See Comparison
NZ_CP107428.1	See Comparison

Identical Plasmids

100% Sequence Identity

NZ_CP107400.1

Sequence

Accession: NZ_CP107400.1
Description: Klebsiella pneumoniae strain CRKP_26 plasmid unnamed2, complete sequence
Source: refseq
Created at NCBI: Feb. 2, 2023

Host Taxonomy

Assigned Host: Klebsiella pneumoniae (573)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Klebsiella (570)
Species : Klebsiella_pneumoniae (573)
Strain:

Biosample

Accession: 31207055

GEOGRAPHICAL INFORMATION

Original Query: China,Wuhan
Original Query Type: name
Address: China,Wuhan
Coordinates (Lat/Lon): 30.59/114.30

ECOSYSTEM

Original Query: Homo sapiens,lavage fluid
Classification: bronchi,host_associated,respiratory_system
Host-associated Taxon:
- Homo sapiens (9606)

DISEASE

Original Query: infection
DOID/SYMP:
- Disease infectious agent (DOID:0050117 )

Visualization

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore