Plasmid NZ_CP107328.1

Sequence

Nucleotide Information

Accession NZ_CP107328.1
Description Klebsiella pneumoniae strain CRKP_39 plasmid unnamed1, complete sequence
Source refseq
Topology circular
Length 193827 bp
GC Content 0.50 %
Created at NCBI Feb. 2, 2023



Assembly

Genome Data Information

Accession GCF_028219975.1
Assembly Coverage 300


Biosample

Curated Collection Information
Accession 31207068

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Wuhan
Original Query Type name
Coordinates (Lat/Lon) 30.59/114.30
Address China,Wuhan

ECOSYSTEM
Original Query Homo sapiens,sputum
Classification host_associated,respiratory_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query infection
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
    • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

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NZ_CP107346.1 See Comparison
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NZ_CP041374.1 See Comparison
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NZ_CP154345.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP054757.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP107384.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP107373.1 See Comparison
NZ_CP102391.1 See Comparison
NZ_CP107321.1 See Comparison
NZ_CP107346.1 See Comparison
NZ_CP107335.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP084706.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP034124.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP054757.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP146191.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP107373.1 See Comparison
NZ_CP107346.1 See Comparison
NZ_CP107384.1 See Comparison
NZ_CP107328.1 See Comparison
NZ_CP107335.1 See Comparison
NZ_CP107321.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP102391.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP084706.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP034124.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_CP146191.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP054757.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP107335.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP107346.1 See Comparison
NZ_CP107384.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP107373.1 See Comparison
NZ_CP107321.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP102391.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP084706.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP034124.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP146191.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054757.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_CP107346.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP107373.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP107384.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP107335.1 See Comparison
NZ_CP107321.1 See Comparison
NZ_CP102391.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP084706.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP034124.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP146191.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP054757.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP107346.1 See Comparison
NZ_CP107373.1 See Comparison
NZ_CP107321.1 See Comparison
NZ_CP107384.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP107335.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP102391.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP034124.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP084706.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP138524.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP146191.1 See Comparison
NZ_CP141667.1 See Comparison
NZ_CP054721.1 See Comparison
NZ_CP054727.1 See Comparison
NZ_CP054781.1 See Comparison
NZ_CP054751.1 See Comparison
NZ_CP054763.1 See Comparison
NZ_CP054733.1 See Comparison
NZ_CP054739.1 See Comparison
NZ_CP054745.1 See Comparison
NZ_CP054769.1 See Comparison
NZ_CP054775.1 See Comparison
NZ_CP054757.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore