Plasmid NZ_CP103656.1

Sequence

Nucleotide Information

Accession NZ_CP103656.1
Description Klebsiella pneumoniae strain 1159 plasmid pMB5730_2, complete sequence
Source refseq
Topology circular
Length 5714 bp
GC Content 0.49 %
Created at NCBI Sept. 6, 2022



Assembly

Genome Data Information

Accession GCF_024918315.1
Assembly Coverage 133


Biosample

Curated Collection Information
Accession 28173992

PLASMID INFORMATION
Genotype ST307

GEOGRAPHICAL INFORMATION
Original Query 29.7068N;95.3971W
Original Query Type coordinates
Coordinates (Lat/Lon) 29.71/-95.40
Address University of Texas MD Anderson Cancer Center, 1515, Holcombe Boulevard, Texas Medical Center, Houston, Harris County, Texas, 77030, United States

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Bacteremia
DOID/SYMP
  • Bacterial infectious disease (DOID:104 )
    • A disease by infectious agent that results_in infection, has_material_basis_in Bacteria.
    • Has_material_basis_in: ['bacteria']

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP103656.1 See Comparison
NZ_AP022118.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067587.1 See Comparison
CP067684.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067656.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067519.1 See Comparison
CP067611.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067587.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067684.1 See Comparison
CP067519.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067468.1 See Comparison
CP067947.1 See Comparison
NZ_AP022118.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067861.1 See Comparison
CP067735.1 See Comparison
CP067611.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067587.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067684.1 See Comparison
CP067947.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067519.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067519.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067684.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
NZ_AP022118.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067684.1 See Comparison
CP067587.1 See Comparison
CP067519.1 See Comparison
CP067468.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067468.1 See Comparison
CP067816.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067947.1 See Comparison
CP067611.1 See Comparison
CP067587.1 See Comparison
NZ_AP022118.1 See Comparison
CP067758.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067816.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067857.1 See Comparison
CP067735.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067519.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067684.1 See Comparison
CP067656.1 See Comparison
CP067468.1 See Comparison
CP067587.1 See Comparison


Identical Plasmids

100% Sequence Identity


















Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore