Plasmid CP067926.1

Sequence

Nucleotide Information

Accession CP067926.1
Description Klebsiella pneumoniae strain ARLG-3188 plasmid pC242_4, complete sequence
Source insd
Topology circular
Length 5714 bp
GC Content 0.49 %
Created at NCBI March 2, 2022



Assembly

Genome Data Information

Accession GCF_022439125.1
Assembly Coverage 357


Biosample

Curated Collection Information
Accession 15868961

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,South
Original Query Type name
Coordinates (Lat/Lon) 33.31/-118.34
Address USA,South

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067684.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067587.1 See Comparison
CP067519.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
CP067611.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
NZ_CP103656.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067684.1 See Comparison
CP067587.1 See Comparison
CP067656.1 See Comparison
CP067816.1 See Comparison
CP067519.1 See Comparison
CP067630.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
NZ_CP103656.1 See Comparison
CP067519.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067926.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067684.1 See Comparison
CP067656.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067587.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
CP067947.1 See Comparison
NZ_CP103656.1 See Comparison
CP067684.1 See Comparison
CP067881.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067749.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067735.1 See Comparison
CP067656.1 See Comparison
CP067519.1 See Comparison
CP067468.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067881.1 See Comparison
CP067587.1 See Comparison
NZ_AP022118.1 See Comparison
NZ_CP103656.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067684.1 See Comparison
CP067656.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
NZ_CP103656.1 See Comparison
CP067519.1 See Comparison
CP067468.1 See Comparison
NZ_AP022118.1 See Comparison
CP067630.1 See Comparison
CP067611.1 See Comparison
CP067587.1 See Comparison
CP067861.1 See Comparison
CP067857.1 See Comparison
CP067852.1 See Comparison
CP067840.1 See Comparison
CP067816.1 See Comparison
CP067758.1 See Comparison
CP067947.1 See Comparison
CP067975.1 See Comparison
CP067930.1 See Comparison
CP067656.1 See Comparison
CP067749.1 See Comparison
CP067735.1 See Comparison
CP067630.1 See Comparison
CP067684.1 See Comparison
CP067611.1 See Comparison
CP067587.1 See Comparison
CP067881.1 See Comparison
CP067468.1 See Comparison
NZ_CP103656.1 See Comparison
CP067519.1 See Comparison
NZ_AP022118.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore